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Related publications (29)

Towards Trustworthy Deep Learning for Image Reconstruction

The remarkable ability of deep learning (DL) models to approximate high-dimensional functions from samples has sparked a revolution across numerous scientific and industrial domains that cannot be overemphasized. In sensitive applications, the good perform ...

EPFL2024

Maximum likelihood bolometry for ASDEX upgrade experiments

Olivier Claude Martin Février, Riccardo Rossi

Bolometry is an essential diagnostic for calculating the power balances and for the understanding of different physical aspects of tokamak experiments. The reconstruction method based on the Maximum Likelihood (ML) principle, developed initially for JET, h ...

Iop Publishing Ltd2023

3D reconstruction of curvilinear one-dimensional objects viewed in transmission electron microscopy

Gulnaz Ganeeva

To obtain a more complete understanding of material microstructure at the nanoscale and to gain profound insights into their properties, there is a growing need for more efficient and precise methods that can streamline the process of 3D imaging using a tr ...

EPFL2023

Exploring Novel Modalities for Optical Diffraction Tomography

Amirhossein Saba Shirvan

In the past decade, optical diffraction tomography has gained a lot of attention for its ability to create label-free three-dimensional (3D) images of the refractive index distribution of biological samples using scattered fields measured through holograph ...

EPFL2023

Correlating cryo-super resolution radial fluctuations and dual-axis cryo-scanning transmission electron tomography to bridge the light-electron resolution gap

Prabhu Prasad Swain

Visualization of organelles and their interactions with other features in the native cell remains a challenge in modern biology. We have introduced cryo-scanning transmission electron tomography (CSTET), which can ac-cess 3D volumes on the scale of 1 micro ...

Elsevier2023

Practical computational imaging by use of spatiotemporal light modulation: from simulations to applications in biological microscopy

François Thierry M Marelli

Optical microscopy is an essential tool for biologists, who are often faced with the need to overcome the spatial and temporal resolution limitations of their devices to capture finer details. As upgrading imaging hardware is expensive, computational metho ...

EPFL2023

A Statistical Framework to Investigate the Optimality of Signal-Reconstruction Methods

Michaël Unser, Pakshal Narendra Bohra, Pol del Aguila Pla

We present a statistical framework to benchmark the performance of reconstruction algorithms for linear inverse problems, in particular, neural-network-based methods that require large quantities of training data. We generate synthetic signals as realizati ...

2023

2.5 Hz sample rate time-domain near-infrared optical tomography based on SPAD-camera image tissue hemodynamics

Edoardo Charbon, Scott Anthony Lindner, Jingjing Jiang, Martin Wolf

Tim-domain near-infrared optical tomography (TD NIROT) techniques based on diffuse light were gaining performance over the last years. They are capable of imaging tissue at several centimeters depth and reveal clinically relevant information, such as tissu ...

OPTICAL SOC AMER2022

Towards ‘Fourth Paradigm’ Spectral Sensing

Marilyne Andersen, Forrest Simon Webler, Manuel Spitschan

Reconstruction algorithms are at the forefront of accessible and compact data collection. In this paper, we present a novel reconstruction algorithm, SpecRA, that adapts based on the relative rarity of a signal compared to previous observations. We leverag ...

2022

Advanced Techniques in Optical Diffraction Tomography

Ahmed Bassam Sayed Ayoub Mohamed Emam

In this thesis, we study the 3 challenges described above. First, we study different reconstruction techniques and assess the fidelity of each reconstruction results by means of structured illumination and phase conjugation. By reconstructing the 3D refrac ...

EPFL2022

Amplitude and phase reconstruction for Low-Energy Electron Holography of individual proteins

Hannah Julia Ochner

Single-molecule imaging methods are of importance in structural biology, and specifically in the imaging of proteins, since they can elucidate conformational variability and structural changes that might be lost in imaging methods relying on averaging proc ...

EPFL2022

Asymptotic Errors for Teacher-Student Convex Generalized Linear Models (Or: How to Prove Kabashima’s Replica Formula)

Florent Gérard Krzakala, Alia Abbara

There has been a recent surge of interest in the study of asymptotic reconstruction performance in various cases of generalized linear estimation problems in the teacher-student setting, especially for the case of i.i.d standard normal matrices. Here, we g ...

2022

Impulsive noise removal via a blind CNN enhanced by an iterative post-processing

Hatef Otroshi Shahreza, Seyedeh Sahar Sadrizadeh

In digital imaging, especially in the process of data acquisition and transmission, images are often affected by impulsive noise. Therefore, it is essential to remove impulsive noise from images before any further processing. Due to the remarkable performa ...

ELSEVIER2022

Piecewise linear interface-capturing volume-of-fluid method in axisymmetric cylindrical coordinates

Andreas Pautz, Lubomír Bures, Yohei Sato

The paper describes a novel implementation of the piecewise linear interface-capturing volume-of-fluid method (PLIC-VOF) in axisymmetric cylindrical coordinates. The principal innovative feature involved in this work is that both the forward and inverse re ...

ACADEMIC PRESS INC ELSEVIER SCIENCE2021

Three-Dimensional Cubic Barcodes

Martin Vetterli, Golnooshsadat Elhami, Adam James Scholefield

We consider three-dimensional cubic barcodes, consisting of smaller cubes, each built from one of two possible materials and carry one bit of information. To retrieve the information stored in the barcode, we measure a 2-D projection of the barcode using a ...

2022

Polarization-sensitive optics diffraction tomography

Demetri Psaltis, Ahmed Ayoub, Joowon Lim, Elizabeth Elena Antoine, Amirhossein Saba Shirvan

Polarization of light has been widely used as a contrast mechanism in two-dimensional (2D) microscopy and also in some three-dimensional (3D) imaging modalities. In this paper, we report the 3D tomographic reconstruction of the refractive index (RI) tensor ...

2021

Learning Lipschitz-Controlled Activation Functions in Neural Networks for Plug-and-Play Image Reconstruction Methods

Michaël Unser, Dimitris Perdios, Sébastien Alexandre Emery, Pakshal Narendra Bohra, Alexis Marie Frederic Goujon

Ill-posed linear inverse problems are frequently encountered in image reconstruction tasks. Image reconstruction methods that combine the Plug-and-Play (PnP) priors framework with convolutional neural network (CNN) based denoisers have shown impressive per ...

2021

3D reconstruction of weakly scattering objects from 2D intensity-only measurements using the Wolf transform

Demetri Psaltis, Ahmed Ayoub, Joowon Lim, Elizabeth Elena Antoine

A new approach to optical diffraction tomography (ODT) based on intensity measurements is presented. By applying the Wolf transform directly to intensity measurements, we observed unexpected behavior in the 3D reconstruction of the sample. Such a reconstru ...

2021

Model-based 3D Face Reconstruction

Christophe René Joseph Ecabert

The human face plays an essential role in social interactions as it brings information about someone's identity, state of mind, or mood. People are, by nature, very good at catching this non-spoken information. Therefore, scientists have been interested in ...

EPFL2021

Superluminal Motion-Assisted Four-Dimensional Light-in-Flight Imaging

Edoardo Charbon, Kazuhiro Morimoto, Andrei Ardelean, Ming-Lo Wu

Advances in high-speed imaging techniques have opened new possibilities for capturing ultrafast phenomena such as light propagation in air or through media. Capturing light in flight in three-dimensional xyt space has been reported based on various types o ...

American Physical Society2021

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