Publications related to Soil food web

Investigation of microbial community dynamics in soil during variable hydrological forcing

Climate change is expected to alter the temporal distribution of precipitation events, leading to prolonged drought periods and an increased frequency of extreme precipitation events. Changes in precipitation pattern will directly affect soil moisture dyna ...

EPFL2024

The cost of adaptability: resource availability constrains functional stability under pulsed disturbances

Hannes Markus Peter

Global change exposes ecosystems to changes in the frequency, magnitude, and concomitancy of disturbances, which impact the composition and functioning of these systems. Here, we experimentally evaluate the effects of salinity disturbances and eutrophicati ...

Amer Soc Microbiology2024

Food web structure and energy flux dynamics, but not taxonomic richness, influence microbial ecosystem functions in a Sphagnum-dominated peatland

Alexandre Buttler, Edward Mitchell, Vincent Eric Jules Jassey

Soil microbial communities are vital for multiple ecosystem processes and services. In particular, soil microbial food webs are key determinants of soil biodiversity, functioning and stability. Unclear, however, is how struc-tural features of food webs, su ...

ELSEVIER FRANCE-EDITIONS SCIENTIFIQUES MEDICALES ELSEVIER2023

What happens to biomass burning-emitted particles in the ocean? A laboratory experimental approach based on their tracers

Christos Panagiotopoulos

Wildfires, controlled burns, and biofuel combustion (biomass burning or BB) are major contributors to particulate matter in the atmosphere and thus have an impact on climate, human health, and ecosystems. Once emitted, the particulate matter derived from B ...

Elsevier2023

Mercury isotope evidence for Arctic summertime re-emission of mercury from the cryosphere

Jakob Boyd Pernov, Jenny Thomas

During Arctic springtime, halogen radicals oxidize atmospheric elemental mercury (Hg0), which deposits to the cryosphere. This is followed by a summertime atmospheric Hg0 peak that is thought to resultmostly fromterrestrial Hg inputs to the ArcticOcean, fo ...

Nature Research2022

Genomic and metabolic adaptations of biofilms to ecological windows of opportunity in glacier-fed streams

Tom Ian Battin, Hannes Markus Peter, Susheel Bhanu Busi, Grégoire Marie Octave Edouard Michoud, Leïla Ezzat, Massimo Bourquin, Matteo Tolosano, Tyler Joe Kohler, Stylianos Fodelianakis, Paraskevi Pramateftaki, Vincent Henri De Staercke, Michail Styllas, Martina Andrea Schön

In glacier-fed streams, ecological windows of opportunity allow complex microbial biofilms to develop and transiently form the basis of the food web, thereby controlling key ecosystem processes. Using metagenome-assembled genomes, we unravel strategies tha ...

Springer2022

Soil-Structure Interaction effects on the seismic behavior of steel moment resisting frames: Preliminary assessment

Dimitrios Lignos

The purpose of this paper is to assess the influence of soil-structure interaction and site effects on the seismic behavior of steel moment-resisting frames, with a view to describing the underlying “physics” behind the damage mechanisms triggered. We exam ...

European Earthquake Engineering Association2022

Influence of Microplastics on Microbial Structure, Function, and Mechanical Properties of Stream Periphyton

Kristin Schirmer, Ahmed Tlili, Renata Behra

Periphyton is a freshwater biofilm composed of prokaryotic and eukaryotic communities that occupy rocks and sediments, forming the base of the food web and playing a key role in nutrient cycling. Given the large surface that periphyton comprises, it may al ...

FRONTIERS MEDIA SA2022

21 000 birds in 4.5 h: efficient large‐scale seabird detection with machine learning

Devis Tuia, Benjamin Alexander Kellenberger

We address the task of automatically detecting and counting seabirds in unmanned aerial vehicle (UAV) imagery using deep convolutional neural networks (CNNs). Our study area, the coast of West Africa, harbours significant breeding colonies of terns and gul ...

2021

Soil-structure interaction of surface footings

Lyesse Laloui, Cristiano Garbellini

Limit-state analysis of soil-structure interacting systems is a classical problem in theoretical and applied soil mechanics. Usually, the capacities of both components are evaluated separately. However, it is well known that soil-structure interaction play ...

2021

OUR COMMON SOILS: West Lausanne Urbanization as Anthropedogenesis, A Section through the Spaces and Times of Urban Soils

Antoine Vialle

Motivated by ever-increasing soil degradation and artificialization due to past and present urban growth dynamics, the current trend of spatial planning policies at the European and Swiss levels is promoting increased soil protection, by avoiding new devel ...

EPFL2021

Predicting spatial patterns of soil bacteria under current and future environmental conditions

Nicolas Jean Philippe Guex, Jan Roelof van der Meer, Marco Pagni, Aline Buri

Soil bacteria are largely missing from future biodiversity assessments hindering comprehensive forecasts of ecosystem changes. Soil bacterial communities are expected to be more strongly driven by pH and less by other edaphic and climatic factors. Thus, al ...

2021

Both diversity and functional composition affect productivity and water use efficiency in experimental temperate grasslands

Charlotte Grossiord, Margaux Clara Lou Didion-Gency

Many experiments have shown that biodiversity promotes ecosystem functioning and stability and that this relationship varies with resource availability. However, we still have a poor understanding of the underlying physiological and ecological mechanisms d ...

WILEY2021

Thinking like a consumer: Linking aquatic basal metabolism and consumer dynamics

Tom Ian Battin, Marta Boix Canadell, Janine Rüegg

The increasing availability of high‐frequency freshwater ecosystem metabolism data provides an opportunity to identify links between metabolic regimes, as gross primary production and ecosystem respiration patterns, and consumer energetics with the potenti ...

2021

Assessing the responses of Sphagnum micro-eukaryotes to climate changes using high throughput sequencing

Alexandre Buttler, Edward Mitchell, Vincent Eric Jules Jassey, Mariusz Lamentowicz, Enrique Lara

Current projections suggest that climate warming will be accompanied by more frequent and severe drought events. Peatlands store ca. one third of the world's soil organic carbon. Warming and drought may cause peatlands to become carbon sources through stim ...

PEERJ INC2020

Heterotrophic Foraminifera Capable of Inorganic Nitrogen Assimilation

Anders Meibom, Charlotte Madeleine Nicole Lekieffre, Emmanuelle Geslin

Nitrogen availability often limits biological productivity in marine systems, where inorganic nitrogen, such as ammonium is assimilated into the food web by bacteria and photoautotrophic eukaryotes. Recently, ammonium assimilation was observed in kleptopla ...

Frontiers Media SA2020

Evaluating Alternative Metacommunity Hypotheses for Diatoms in the McMurdo Dry Valleys Using Simulations and Remote Sensing Data

Tyler Joe Kohler

Diatoms are diverse and widespread freshwater Eukaryotes that make excellent microbial subjects for addressing questions in metacommunity ecology. In the McMurdo Dry Valleys of Antarctica, the simple trophic structure of glacier-fed streams provides an ide ...

2020

In situ eutrophication stimulates dinitrogen fixation, denitrification, and productivity in Red Sea coral reefs

Nils Rädecker, Hal Hunt Jones II

Eutrophication (i.e. the increase of [in-]organic nutrients) may affect the functioning of coral reefs, but knowledge about the effects on nitrogen (N) cycling and its relationship to productivity within benthic reef communities is scarce. Thus, we investi ...

2020

Effects of Sphagnum Leachate on Competitive Sphagnum Microbiome Depend on Species and Time

Alexandre Buttler, Luca Bragazza, Constant Signarbieux, Vincent Eric Jules Jassey, Bjorn Jozef Maria Robroek, Samuel Thomas Gabriel Hamard

Plant specialized metabolites play an important role in soil carbon (C) and nutrient fluxes. Through anti-microbial effects, they can modulate microbial assemblages and associated microbial-driven processes, such as nutrient cycling, so to positively or ne ...

Frontiers Media SA2019

Catchment land cover influences macroinvertebrate food-web structure and energy flow pathways in mountain streams

Tom Ian Battin, Christopher Robinson

Understanding how different food resources sustain stream food webs is fundamental towards increasing our knowledge on trophic structure and energy flow pathways in fluvial ecosystems. 2. Food webs in small mountain streams are sustained by autochthonou ...

2019