Lectures related to Serial analysis of gene expression

Single-cell and Spatially Resolved RNA-seq

Explores single-cell RNA-seq, tissue dissociation, capture methods, and differential gene expression analysis.

Gene Expression: Introduction and Data Analysis

Covers gene expression data quantification, genome analysis, and large-scale studies.

How to Interpret Gene Expression Heat Maps

Offers a tutorial on interpreting gene expression heat maps from the Allen Institute.

Single-cell Temporal-Omics: Inference of Transcriptional Dynamics

On Single-cell Temporal-Omics explores inferring transcriptional dynamics from snapshot data and interpreting RNA velocity in RNA metabolism.

Using AGEA in the Allen Mouse Brain Atlas

Introduces the Anatomic Gene Expression Atlas (AGEA) for exploring gene expression patterns in the mouse brain.

Bulk Transcriptome Analysis: RNA-seq Workflow and Gene Expression Analysis

Explains transcriptomics, RNA-seq workflow, and gene expression analysis for disease biomarkers.

The Molecules of Life: Nucleic Acids

Covers the structure and functions of nucleic acids, including genetic information storage and gene expression.

BrainSpan Atlas of Developing Human Brain

Covers the BrainSpan Atlas, mapping gene expression in the developing human brain.

Early Life Modulators of Aging and Age-Associated Diseases

Delves into the effects of early-life oxidative stress on lifespan and age-related diseases in C. elegans.

Performing a search in the Allen Brain Atlas

Covers the tutorial on performing a search in the Allen Brain Atlas, exploring gene expression data.

Tissue-level Wave Patterns: Cellular Oscillators and Genetic Waves

Explores tissue-level wave patterns, cellular oscillators, genetic waves, and gene expression patterns in cellular differentiation.

Quantile Normalization in Genomics

Explores quantile normalization in genomics, emphasizing data preparation, loading, filtering, and the significance of accurate gene expression analysis.

Combining profiles: Electrical, Morphological, Molecular

Covers combining electrical, morphological, and molecular profiles to study single neurons.

Immunoengineering: Techniques and Applications

Explores immunoengineering techniques like flow cytometry and microengraving for capturing immune responses and live cell information.

Genomics: Gene Regulatory Networks

Explores gene regulatory networks, protein-DNA interactions, and regulatory elements in genomics.

The Allen Institute Mouse Brain Data

Explores the Allen Institute Mouse Brain data collection and development processes.

Immunoengineering: Engineering the Immune System

Delves into the complexity of the immune system, immunoengineering applications, and microengraving techniques for cell analysis.

Ribosome Profiling: Techniques and Applications

Explores ribosome profiling techniques, chemical applications, and translational insights in gene-specific features and behavioral responses.

Genomic Data Analysis: Techniques and Applications

Covers gene expression measurement techniques and analysis methods in genomics.

Compartmental modeling: Fundamentals and Applications

Explores compartmental modeling in biomedical imaging, emphasizing the importance of understanding linear systems and intracellular glucose metabolism measurement.