Biological pumpThe biological pump (or ocean carbon biological pump or marine biological carbon pump) is the ocean's biologically driven sequestration of carbon from the atmosphere and land runoff to the ocean interior and seafloor sediments. In other words, it is a biologically mediated process which results in the sequestering of carbon in the deep ocean away from the atmosphere and the land. The biological pump is the biological component of the "marine carbon pump" which contains both a physical and biological component.
Marine microorganismsMarine microorganisms are defined by their habitat as microorganisms living in a marine environment, that is, in the saltwater of a sea or ocean or the brackish water of a coastal estuary. A microorganism (or microbe) is any microscopic living organism or virus, that is too small to see with the unaided human eye without magnification. Microorganisms are very diverse. They can be single-celled or multicellular and include bacteria, archaea, viruses and most protozoa, as well as some fungi, algae, and animals, such as rotifers and copepods.
Iron fertilizationIron fertilization is the intentional introduction of iron to iron-poor areas of the ocean surface to stimulate phytoplankton production. This is intended to enhance biological productivity and/or accelerate carbon dioxide () sequestration from the atmosphere. Iron is a trace element necessary for photosynthesis in plants. It is highly insoluble in sea water and in a variety of locations is the limiting nutrient for phytoplankton growth. Large algal blooms can be created by supplying iron to iron-deficient ocean waters.
F-ratio (oceanography)In oceanic biogeochemistry, the f-ratio is the fraction of total primary production fuelled by nitrate (as opposed to that fuelled by other nitrogen compounds such as ammonium). The ratio was originally defined by Richard Eppley and Bruce Peterson in one of the first papers estimating global oceanic production. This fraction was originally believed significant because it appeared to directly relate to the sinking (export) flux of organic marine snow from the surface ocean by the biological pump.
Vampire squidThe vampire squid (Vampyroteuthis infernalis, lit. 'vampire squid from hell') is a small cephalopod found throughout temperate and tropical oceans in extreme deep sea conditions. The vampire squid uses its bioluminescent organs and its unique oxygen metabolism to thrive in the parts of the ocean with the lowest concentrations of oxygen. It has two long retractile filaments, located between the first two pairs of arms on its dorsal side, which distinguish it from both octopuses and squids, and places it in its own order, Vampyromorphida, although its closest relatives are octopods.
Water columnThe (oceanic) water column is a concept used in oceanography to describe the physical (temperature, salinity, light penetration) and chemical (pH, dissolved oxygen, nutrient salts) characteristics of seawater at different depths for a defined geographical point. Generally, vertical profiles are made of temperature, salinity, chemical parameters at a defined point along the water column.
Sediment trapSediment traps are instruments used in oceanography and limnology to measure the quantity of sinking particulate organic (and inorganic) material in aquatic systems, usually oceans, lakes, or reservoirs. This flux of material is the product of biological and ecological processes typically within the surface euphotic zone, and is of interest to scientists studying the role of the biological pump in the carbon cycle. Sediments traps normally consist of an upward-facing funnel that directs sinking particulate matter (e.
Microbial loopThe microbial loop describes a trophic pathway where, in aquatic systems, dissolved organic carbon (DOC) is returned to higher trophic levels via its incorporation into bacterial biomass, and then coupled with the classic food chain formed by phytoplankton-zooplankton-nekton. In soil systems, the microbial loop refers to soil carbon. The term microbial loop was coined by Farooq Azam, Tom Fenchel et al. in 1983 to include the role played by bacteria in the carbon and nutrient cycles of the marine environment.
Deep seaThe deep sea is broadly defined as the ocean depth where light begins to fade, at an approximate depth of 200 metres (656 feet) or the point of transition from continental shelves to continental slopes. Conditions within the deep sea are a combination of low temperatures, darkness and high pressure. The deep sea is considered the least explored Earth biome as the extreme conditions make the environment difficult to access and explore. Organisms living within the deep sea have a variety of adaptations to survive in these conditions.
Mesopelagic zoneThe mesopelagic zone (Greek μέσον, middle), also known as the middle pelagic or twilight zone, is the part of the pelagic zone that lies between the photic epipelagic and the aphotic bathypelagic zones. It is defined by light, and begins at the depth where only 1% of incident light reaches and ends where there is no light; the depths of this zone are between approximately 200 to 1,000 meters (~656 to 3,280 feet) below the ocean surface.
Diel vertical migrationDiel vertical migration (DVM), also known as diurnal vertical migration, is a pattern of movement used by some organisms, such as copepods, living in the ocean and in lakes. The word "diel" (IPA: ˈdaɪ.əl, ˈdiː.əl) comes from diēs, and means a 24-hour period. The migration occurs when organisms move up to the uppermost layer of the sea at night and return to the bottom of the daylight zone of the oceans or to the dense, bottom layer of lakes during the day.
Aphotic zoneThe aphotic zone (aphotic from Greek prefix ἀ- + φῶς "without light") is the portion of a lake or ocean where there is little or no sunlight. It is formally defined as the depths beyond which less than 1 percent of sunlight penetrates. Above the aphotic zone is the photic zone, which consists of the euphotic zone and the disphotic zone. The euphotic zone is the layer of water in which there is enough light for net photosynthesis to occur.
Bathypelagic zoneThe bathypelagic zone or bathyal zone (from Greek βαθύς (bathýs), deep) is the part of the open ocean that extends from a depth of below the ocean surface. It lies between the mesopelagic above and the abyssopelagic below. The bathypelagic is also known as the midnight zone because of the lack of sunlight; this feature does not allow for photosynthesis-driven primary production, preventing growth of phytoplankton or aquatic plants. Although larger by volume than the photic zone, human knowledge of the bathypelagic zone remains limited by ability to explore the deep ocean.
Particulate organic matterParticulate organic matter (POM) is a fraction of total organic matter operationally defined as that which does not pass through a filter pore size that typically ranges in size from 0.053 millimeters (53 μm) to 2 millimeters. Particulate organic carbon (POC) is a closely related term often used interchangeably with POM. POC refers specifically to the mass of carbon in the particulate organic material, while POM refers to the total mass of the particulate organic matter.
Abyssal zoneThe abyssal zone or abyssopelagic zone is a layer of the pelagic zone of the ocean. The word abyss comes from the Greek word ἄβυσσος (), meaning "bottomless". At depths of , this zone remains in perpetual darkness. It covers 83% of the total area of the ocean and 60% of Earth's surface. The abyssal zone has temperatures around through the large majority of its mass. The water pressure can reach up to . Due to there being no light, there are no plants producing oxygen, which instead primarily comes from ice that had melted long ago from the polar regions.
OceanThe ocean (also known as the sea or the world ocean) is a body of salt water that covers approximately 70.8% of the Earth and contains 97% of Earth's water. The term ocean also refers to any of the large bodies of water into which the world ocean is conventionally divided. Distinct names are used to identify five different areas of the ocean: Pacific (the largest), Atlantic, Indian, Southern, and Arctic (the smallest). Seawater covers approximately of the planet.
ZooplanktonZooplankton are the animal component of the planktonic community (the "zoo-" prefix comes from ζῷον). Plankton are aquatic organisms that are unable to swim effectively against currents. Consequently, they drift or are carried along by currents in the ocean, or by currents in seas, lakes or rivers. Zooplankton can be contrasted with phytoplankton, which are the plant component of the plankton community (the "phyto-" prefix comes from φῠτόν). Zooplankton are heterotrophic (other-feeding), whereas phytoplankton are autotrophic (self-feeding).
Marine prokaryotesMarine prokaryotes are marine bacteria and marine archaea. They are defined by their habitat as prokaryotes that live in marine environments, that is, in the saltwater of seas or oceans or the brackish water of coastal estuaries. All cellular life forms can be divided into prokaryotes and eukaryotes. Eukaryotes are organisms whose cells have a nucleus enclosed within membranes, whereas prokaryotes are the organisms that do not have a nucleus enclosed within a membrane.
RemineralisationIn biogeochemistry, remineralisation (or remineralization) refers to the breakdown or transformation of organic matter (those molecules derived from a biological source) into its simplest inorganic forms. These transformations form a crucial link within ecosystems as they are responsible for liberating the energy stored in organic molecules and recycling matter within the system to be reused as nutrients by other organisms. Remineralisation is normally viewed as it relates to the cycling of the major biologically important elements such as carbon, nitrogen and phosphorus.
Pelagic zoneThe pelagic zone consists of the water column of the open ocean and can be further divided into regions by depth. The word pelagic is derived . The pelagic zone can be thought of as an imaginary cylinder or water column between the surface of the sea and the bottom. Conditions in the water column change with depth: pressure increases; temperature and light decrease; salinity, oxygen, micronutrients (such as iron, magnesium and calcium) all change.
