Publications related to Autotroph

Metabolic Performance and Fate of Electrons during Nitrate-Reducing Fe(II) Oxidation by the Autotrophic Enrichment Culture KS Grown at Different Initial Fe/N Ratios

Autotrophic nitrate-reducing Fe(II)-oxidizing (NRFeOx) microorganisms fix CO2 and oxidize Fe(II) coupled to denitrification, influencing carbon, iron, and nitrogen cycles in pH-neutral, anoxic environments. However, the distribution of electrons from Fe(II ...

AMER SOC MICROBIOLOGY2023

Sulfurospirillum diekertiae sp. nov., a tetrachloroethene-respiring bacterium isolated from contaminated soil

Christof Holliger, Julien Maillard, Junxiong Wang

Two anaerobic, tetrachloroethene- (PCE-) respiring bacterial isolates, designated strain ACSDCE T and strain ACSTCE, were characterized using a polyphasic approach. Cells were Gram-stain-negative, motile, non-spore-forming and shared a vibrioid- to spirill ...

2023

Photobiology and metabolic interactions in the symbiotic jellyfish Cassiopea

Niclas Heidelberg Lyndby

The symbiont-bearing jellyfish Cassiopea live a benthic lifestyle, positioning themselves upside-down on sediments in shallow waters to allow their endosymbiotic algae to photosynthesize in the sunlight. Over the last decades Cassiopea has become increasin ...

EPFL2023

Symbiotic nutrient cycling enables the long-term survival of Aiptasia in the absence of heterotrophic food sources

Anders Meibom, Nils Rädecker

Phototrophic Cnidaria are mixotrophic organisms that can complement their het- erotrophic diet with nutrients assimilated by their algal endosymbionts. Metabolic mod- els suggest that the translocation of photosynthates and their derivatives from the algae ...

2023

Homogeneous Environmental Selection Structures the Bacterial Communities of Benthic Biofilms in Proglacial Floodplain Streams

Tom Ian Battin, Hannes Markus Peter, Susheel Bhanu Busi, Grégoire Marie Octave Edouard Michoud, Leïla Ezzat, Massimo Bourquin, Jade Brandani, Tyler Joe Kohler, Stylianos Fodelianakis

Streams draining proglacial floodplains harbor benthic biofilms comprised of diverse microbial communities. These high-mountain ecosystems are rapidly changing with climate warming, and it is therefore critical to better understand the mechanisms underlyin ...

AMER SOC MICROBIOLOGY2023

Disentangling the effects of climate change and reoligotrophication on primary production in a large lake

Alfred Johny Wüest, Hugo Nicolás Ulloa Sánchez, Shubham Krishna, Emile Barbe

Climate change and reduction in nutrient loads have significant effects on primary production and phytoplankton growth dynamics. Since in the last few decades in many regions, nutrients in lakes were reduced simultaneously as the climate changed. Yet, it r ...

SPRINGER BASEL AG2023

Growth and persistence of an aerobic microbial community in Wyoming bentonite MX-80 despite anoxic in-situ conditions

Rizlan Bernier-Latmani, Manon Frutschi, Niels Burzan, Roberta Murad Lima

Microbial activity has the potential to enhance the corrosion of high-level radioactive waste disposal canisters, which, in the proposed Swiss deep geological repository, will be embedded in bentonite and placed in the Opalinus Clay rock formation (OPA). T ...

Frontiers Media SA2022

Modeling the coupled dynamics of stream metabolism and microbial biomass

Tom Ian Battin, Enrico Bertuzzo, Pier Luigi Segatto

Estimating and interpreting ecosystem metabolism remains an important challenge in stream ecology. Here, we propose a novel approach to model, estimate, and predict multiseasonal patterns of stream metabolism (gross primary production [GPP] and ecosystem r ...

American Society of Limnology and Oceanography2020

Assessing the responses of Sphagnum micro-eukaryotes to climate changes using high throughput sequencing

Alexandre Buttler, Edward Mitchell, Vincent Eric Jules Jassey, Mariusz Lamentowicz, Enrique Lara

Current projections suggest that climate warming will be accompanied by more frequent and severe drought events. Peatlands store ca. one third of the world's soil organic carbon. Warming and drought may cause peatlands to become carbon sources through stim ...

PEERJ INC2020

Patterns in Microbial Assemblages Exported From the Meltwater of Arctic and Sub-Arctic Glaciers

Tyler Joe Kohler

Meltwater streams connect the glacial cryosphere with downstream ecosystems. Dissolved and particulate matter exported from glacial ecosystems originates from contrasting supraglacial and subglacial environments, and exported microbial cells have the poten ...

Frontiers Media SA2020

Assimilation, translocation, and utilization of carbon between photosynthetic symbiotic dinoflagellates and their planktic foraminifera host

Anders Meibom, Charlotte Madeleine Nicole Lekieffre, Emmanuelle Geslin

Some species of planktic foraminifera inhabiting oligotrophic surface water environments are in an obligate symbiotic relationship with dinoflagellate microalgae, which can assimilate carbon (C) through photosynthesis. However, the mechanism and dynamics o ...

2018

Short-Term Thermal Acclimation Modifies the Metabolic Condition of the Coral Holobiont

Anders Meibom, Thomas Krüger, Emma Mary Gibbin, Julia Marie Jeanne Yvonne Bodin

The nutritional symbiosis between coral hosts and photosynthetic dinoflagellates is fundamental to the functioning of coral reefs. Rising seawater temperatures destabilize this relationship, resulting in drastic declines in world-wide coral cover. Thermal ...

2018

An unexpected role for mixotrophs in the response of peatland carbon cycling to climate warming

Alexandre Buttler, Edward Mitchell, Luca Bragazza, Constant Signarbieux, Vincent Eric Jules Jassey, Bjorn Jozef Maria Robroek, Robert Thomas Edmund Mills, Enrique Lara, Bertrand Fournier

Mixotrophic protists are increasingly recognized for their significant contribution to carbon (C) cycling. As phototrophs they contribute to photosynthetic C fixation, whilst as predators of decomposers, they indirectly influence organic matter decompositi ...

Nature Publishing Group2015

Light availability affects stream biofilm bacterial community composition and function, but not diversity

Tom Ian Battin

Changes in riparian vegetation or water turbidity and browning in streams alter the local light regime with potential implications for stream biofilms and ecosystem functioning. We experimented with biofilms in microcosms grown under a gradient of light in ...

Wiley-Blackwell2015

Interactions of silver and polystyrene nanoparticles with algae

Xiaomei Li

Nanoparticles have various physicochemical properties attributed by their small dimensions. The global production of nanoparticles lead to a raised concern for their environmental impacts. Algae are of highly ecological importance functioning as primary pr ...

EPFL2015

The Response of the Mediterranean Gorgonian Eunicella singularis to Thermal Stress Is Independent of Its Nutritional Regime

Alexandre Buttler, Leïla Ezzat

Over the last few decades, sessile benthic organisms from the Mediterranean Sea have suffered from the global warming of the world's oceans, and several mass mortality events were observed during warm summers. It has been hypothesized that mortality could ...

Public Library Science2013

Genome analysis of Desulfotomaculum kuznetsovii reveals a physiological similarity with Pelotomaculum thermopropionicum

Rizlan Bernier-Latmani

Desulfotomaculum kuznetsovii is a moderately thermophilic member of the polyphyletic spore-forming genus Desulfotomaculum in the family Peptococcaceae. This species is of interest because it originates from deep subsurface thermal mineral water at a depth ...

Genomic Stand Consort2013

Integrated toxicity evaluation of a pulp deposit using organisms of different trophic levels

In order to assess possible adverse effects originating from pulp deposits in a Swiss lake, a sediment quality triad approach was applied with chemical, ecotoxicological and ecological assessment methods. To obtain an integrative picture of the potential e ...

Springer Heidelberg2013

Biologically active secondary metabolites from cyanobacteria

Cyril Portmann

For millennia, nature was the only source of medicine for mankind. Even today natural products represent a large proportion of the drugs in use. In some areas, like cancer or infectious diseases, about 50 % of the compounds used are of natural origin. Cyan ...

EPFL2010

Molecular analysis of the biodiversity of protists in hydrocarbon-polluted and pristine soils

Enrique Lara

Eukaryotic microorganisms are an essential component of the Earth's global diversity. It is believed that the number of protistan taxa far outnumbers the one of viruses and bacteria. The taxonomic classification of these organisms, which also represent the ...

EPFL2005