Publications related to Speciation

Reproductive isolation arises during laboratory adaptation to a novel hot environment

Background: Reproductive isolation can result from adaptive processes (e.g., ecological speciation and mutation-order speciation) or stochastic processes such as "system drift" model. Ecological speciation predicts barriers to gene flow between populations ...

BMC2024

Genetic features and genomic targets of human KRAB-zinc finger proteins

Didier Trono, Jacques Fellay, Priscilla Turelli, Christian Axel Wandall Thorball, Sandra Eloise Kjeldsen, Evaristo Jose Planet Letschert, Julien Léonard Duc, Cyril David Son-Tuyên Pulver, Romain Forey, Bara Khubieh, Alexandre Coudray, Michaël Imbeault, Jonas Caspar De Tribolet-Hardy

Krüppel-associated box (KRAB) domain-containing zinc finger proteins (KZFPs) are one of the largest groups of transcription factors encoded by tetrapods, with 378 members in human alone. KZFP genes are often grouped in clusters reflecting amplification by ...

2023

Mitochondrial Pseudogenes Suggest Repeated Inter-Species Hybridization among Direct Human Ancestors

Konstantin Popadin

The hypothesis that the evolution of humans involves hybridization between diverged species has been actively debated in recent years. We present the following novel evidence in support of this hypothesis: the analysis of nuclear pseudogenes of mtDNA ("NUM ...

MDPI2022

Genomic consequences of colonisation, migration and genetic drift in barn owl insular populations of the eastern Mediterranean

Nicolas Jean Philippe Guex, Eléonore Lavanchy

The study of insular populations was key in the development of evolutionary theory. The successful colonisation of an island depends on the geographic context, and specific characteristics of the organism and the island, but also on stochastic processes. A ...

2022

Linking micro and macroevolution in the presence of migration

Sophie Myriam Hautphenne, Laurent Lehmann, Nicolas Salamin

Understanding macroevolutionary patterns is central to evolutionary biology. This involves the process of divergence within a species, which starts at the microevolutionary level, for instance, when two sub populations evolve towards different phenotypic o ...

ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD2020

Global radiation in a rare biosphere soil diatom

Tyler Joe Kohler

Soil micro-organisms drive the global carbon and nutrient cycles that underlie essential ecosystem functions. Yet, we are only beginning to grasp the drivers of terrestrial microbial diversity and biogeography, which presents a substantial barrier to under ...

Nature Research2020

Non-crystalline tetravalent uranium species in the subsurface: formation and stability

Luca Loreggian

Uranium (U) contamination of ground and surface waters poses an acute hazard on the ecosystem and human health. Since the discovery of microbial U(VI) reduction, U bioremediation has been explored as a promising and cost-effective method compared to tradit ...

EPFL2019

MPA-SSA, design and test of a 65 nm ASIC-based system for particle tracking at HL-LHC featuring on-chip particle discrimination

Yusuf Leblebici, Alessandro Caratelli, Davide Ceresa, Simone Scarfì

Particle tracking detectors for High Energy Physics need a new readout technique to cope with the increase of the collision rate foreseen for the High Luminosity LHC upgrade. In particular, the selection of interesting physics events at the first trigger s ...

IEEE2019

Fostering of advanced mutualism with gut microbiota by Immunoglobulin A

Duncan-Bruce Sutherland

Immunoglobulin A (IgA), the most abundantly secreted antibody isotype in mammals, not only provides direct immune protection to neonates via maternal milk but also helps program the infant immune system by regulating the microbiota. IgA continues to mainta ...

Wiley-Blackwell2016

Nanoparticle - Ionic Liquid Based Catalytic Systems

Alena Karakulina

In recent years ionic liquids have emerged as an important class of compounds for the synthesis of metal nanoparticles. The significant advantage of using ionic liquids is their dual role of reaction solvent and nanoparticle stabilizer. The variability of ...

EPFL2016

A Systematic Survey of an Intragenic Epistatic Landscape

Jeffrey David Jensen, Claudia Bank

Mutations are the source of evolutionary variation. The interactions of multiple mutations can have important effects on fitness and evolutionary trajectories. We have recently described the distribution of fitness effects of all single mutations for a nin ...

Oxford Univ Press2015

Influence of processing routes on morphology and low strain stiffness of polymer/nanofibrillated cellulose composites

Yves Leterrier, Pierre-Etienne Bourban, John Christopher Plummer, Sylvain Cyril Claude Galland, Lars Berglund

The morphology of polymer/nanofibrillated cellulose (NFC) composite sheets produced using different techniques and its influence on low strain stiffness were assessed by optical and transmission electron microscopy. Solvent processing led to relatively hom ...

Maney Publishing2015

Why to account for finite sites in population genetic studies and how to do this with Jaatha 2.0

With the advent of next-generation sequencing technologies, large data sets of several thousand loci from multiple conspecific individuals are available. Such data sets should make it possible to obtain accurate estimates of population genetic parameters, ...

Wiley-Blackwell2013

The influence of pH on iron speciation in podzol extracts: Iron complexes with natural organic matter, and iron mineral nanoparticles

The quantities of natural organic matter (NOM) and associated iron (Fe) in soil extracts are known to increase with increasing extractant pH. However, it was unclear how the extraction pH affects Fe speciation for particles below 30 nm. We used flow field- ...

Elsevier Science Bv2013

The Limits to Parapatric Speciation: Dobzhansky-Muller Incompatibilities in a Continent-Island Model

Claudia Bank

How much gene flow is needed to inhibit speciation by the accumulation of Dobzhansky-Muller incompatibilities (DMIs) in a structured population? Here, we derive these limits in a classical migration-selection model with two haploid or diploid loci and unid ...

Genetics Soc Am2012

Catalysts for High Temperature Gas Cleaning in the Production of Synthetic Natural Gas from Biomass

Bio synthetic natural gas (Bio-SNG) is being proposed as an alternative to the natural gas of fossil origin (NG) [1]. Bio-SNG consists mainly of CH4 (at least 95%mol), has a high heating value (e.g. 10 kWh/m3N), and respects the quality standards of the NG ...

EPFL2012

Tracking genes of ecological relevance using a genome scan in two independent regional population samples of Arabis alpina

Doris Herrmann, Pierre Taberlet

Understanding the genetic basis of adaptation in response to environmental variation is fundamental as adaptation plays a key role in the extension of ecological niches to marginal habitats and in ecological speciation. Based on the assumption that some ge ...

2010

Species-specific effects of polyploidisation and plant traits of Centaurea maculosa and Senecio inaequidens on rhizosphere microorganisms

Alexandre Buttler, Edward Mitchell, Aurélie Thébault

Invasive plant species represent a threat to terrestrial ecosystems, but their effects on the soil biota and the mechanisms involved are not yet well understood. Many invasive species have undergone polyploidisation, leading to the coexistence of various c ...

Springer Verlag2010

Effect of humic acid on Cd(II), Cu(II) and Pb(II) uptake by freshwater algae: kinetic and cell wall speciation considerations

Cristina Lamelas

The present study examines the effect of humic acid on the uptake kinetics of Cd(II), Cu(II), and Pb(II) by the freshwater alga Chlorella kesslerii. The results demonstrated that the relative proportion of Pb in the cell wall layer is greater than that of ...

2009

Resistance of plant communities to invasive species : disentangling invasiveness from invasibility

Aurélie Thébault

Invasive species are nowadays considered as one of the most important threat to biodiversity. By displacing native species, modifying ecosystem functioning and causing substantial losses to agricultural production, they represent a menace to natural and ma ...

EPFL2009