Publications related to Composite data type

Privacy-Preserving Machine Learning on Graphs

Graph Neural Networks (GNNs) have emerged as a powerful tool for learning on graphs, demonstrating exceptional performance in various domains. However, as GNNs become increasingly popular, new challenges arise. One of the most pressing is the need to ensur ...

EPFL2023

CellCharter reveals spatial cell niches associated with tissue remodeling and cell plasticity

Daniele Tavernari, Albert Santamaria Martinez, Giovanni Ciriello

Tissues are organized in cellular niches, the composition and interactions of which can be investigated using spatial omics technologies. However, systematic analyses of tissue composition are challenged by the scale and diversity of the data. Here we pres ...

Nature Portfolio2023

Preprocessing Antarctic Weather Station (AWS) data in python

Michael Lehning, Franziska Gerber

There are many sources providing atmospheric weather station data for the Antarctic continent. However, variable naming, timestamps and data types are highly variable between the different sources. The published python code intends to make processing of di ...

Zenodo2022

Synthesis of Flexible Accelerators for Early Adoption of Ring-LWE Post-quantum Cryptography

Francesco Regazzoni, Subhadeep Banik, Hamid Nejatollahi

The advent of the quantum computer makes current public-key infrastructure insecure. Cryptography community is addressing this problem by designing, efficiently implementing, and evaluating novel public-key algorithms capable of withstanding quantum comput ...

ASSOC COMPUTING MACHINERY2020

Multi-omics reveals abundant mitochondrial genomic and circadian expression variation in the Drosophila Genetic Reference Panel

Maria Litovchenko

Modern biology rapidly generates a wealth of data,which can only be analysed computationally.Despite the variety of available data types,most of them aim to provide an answer to one question: how does genotypic diversity translates into phenotypes? This qu ...

EPFL2020

Contact networks across ages: computational analysis of epidemiological dynamics

Gianrocco Lazzari

For decades mathematical modeling in epidemiology has helped understanding the dynamics of infectious diseases, as well as describe possible intervention scenarios to prevent and control them. However, such models were relying on several assumptions, such ...

EPFL2020

Composite Data Types in Dynamic Dataflow Languages as Copyless Memory Sharing Mechanism

Marco Mattavelli, Endri Bezati, Aurélien François Gilbert Bloch

This paper presents new optimization approaches aiming at reducing the impact of memory accesses on the performance of dataflow programs. The approach is based on introducing a high level management of composite data types in dynamic dataflow programming l ...

2019

Network utility maximization for delay-sensitive applications in unknown communication settings

Stefano D'Aronco

In the last decades the Internet traffic has greatly evolved. The advent of new Internet services and applications has, in fact, led to a significant growth of the amount of data transmitted, as well as to a transformation of the data type. As a matter of ...

EPFL2018

SmarPer: Context-Aware and Automatic Runtime-Permissions for Mobile Devices

Jean-Pierre Hubaux, Kévin Clément Huguenin, Italo Ivan Dacosta Petrocelli, Joana Catarina Soares Machado, Mohammad Emtiyaz Khan, Katarzyna Lucja Olejnik

Permission systems are the main defense that mobile platforms, such as Android and iOS, offer to users to protect their private data from prying apps. However, due to the tension between usability and control, such systems have several limitations that oft ...

IEEE2017

Just-in-time Analytics Over Heterogeneous Data and Hardware

Manolis Karpathiotakis

Industry and academia are continuously becoming more data-driven and data-intensive, relying on the analysis of a wide variety of datasets to gain insights. At the same time, data variety increases continuously across multiple axes. First, data comes in mu ...

EPFL2017

LMS-Verify: Abstraction without Regret for Verified Systems Programming’

Tiark Rompf, Nada Amin

Performance critical software is almost always developed in C, as programmers do not trust high-level languages to deliver the same reliable performance. This is bad because low-level code in unsafe languages attracts security vulnerabilities and because d ...

Assoc Computing Machinery2017

Mumford-Shah and Potts Regularization for Manifold-Valued Data

Martin Kurt Storath

Mumford-Shah and Potts functionals are powerful variational models for regularization which are widely used in signal and image processing; typical applications are edge-preserving denoising and segmentation. Being both non-smooth and non-convex, they are ...

Springer2016

Accelerators for Data Processing

Yusuf Onur Koçberber

The explosive growth in digital data and its growing role in real-time analytics motivate the design of high-performance database management systems (DBMSs). Meanwhile, slowdown in supply voltage scaling has stymied improvements in core performance and ush ...

EPFL2015

Introducing a preliminary Consists Selection in the Locomotive Assignment Problem

Michel Bierlaire, Francesco Piu, Prem Kumar

The Locomotive Assignment Problem (LAP) is a class of planning and scheduling problems solved by assigning a fleet of locomotives to a network of trains. In the planning versions of the LAP, the type of consist (a group of linked locomotives) assigned to e ...

Elsevier2015

Synergy of hyperspectral and microwave remote sensing data to derive bio- and geo-physical parameters for land applications

Jelena Stamenkovic

Retrieval of bio/geophysical variables from remote sensing imagery is an important research field. Due to the development and availability of different EO satellites, especially the ones with hyperspectral sensors, the combined use of radar and optical ima ...

EPFL2015

From Data Quality to Big Data Quality

Gianluigi Viscusi

This article investigates the evolution of data quality issues from traditional structured data managed in relational databases to Big Data. In particular, the paper examines the nature of the relationship between Data Quality and several research coordina ...

2015

Privacy in the Genomic Era

Jean-Pierre Hubaux, Jacques Fellay, Erman Ayday

Genome sequencing technology has advanced at a rapid pace and it is now possible to generate highlydetailed genotypes inexpensively. The collection and analysis of such data has the potential to support various applications, including personalized medical ...

Assoc Computing Machinery2015

Programming with Numerical Uncertainties

Eva Darulova

Numerical software, common in scientific computing or embedded systems, inevitably uses an approximation of the real arithmetic in which most algorithms are designed. In many domains, roundoff errors are not the only source of inaccuracy and measurement as ...

EPFL2014

Meet the Walkers: Accelerating Index Traversals for In-Memory Databases

Babak Falsafi, Boris Robert Grot, Yusuf Onur Koçberber, Javier Picorel Obando, Kevin Lim

The explosive growth in digital data and its growing role in real-time decision support motivate the design of high-performance database management systems (DBMSs). Meanwhile, slowdown in supply voltage scaling has stymied improvements in core performance ...

2013

Updating and curating metabolic pathways of TB

Jocelyne Lew

The sequencing of complete genomes has accelerated biomedical research by providing information about the overall coding capacity of bacterial chromosomes. The original TB annotation resulted in putative functional assignment of similar to 60% of the genes ...

Churchill Livingstone2013