Publications related to Juvenile fish

Impact of substrate clogging on vertical connectivity

Giovanni De Cesare, Romain Maxime Dubuis, Robin Schroff

Connectivity between the hyporheic zone and the flow is essential for the development of benthos and the reproductive success of spawning fish. The infiltration of fine sediment leads to clogging of the riverbed, reducing porosity and vertical water exchan ...

2023

Challenges and approaches in bridging the biomimicry gap in biohybrid systems of fish and robots

Vaios Papaspyros

As the field of ethology advances, especially over the past two decades, the role of animal-robot interaction tools has increasingly become essential. This importance arises from the need for controlled, repetitive, repeatable, and long-duration experiment ...

EPFL2023

Automated flow control of a multi-lane swimming chamber for small fishes indicates species-specific sensitivity to experimental protocols

In fishes, swimming performance is considered an important metric to measure fitness, dispersal and migratory abilities. The swimming performance of individual larval fishes is often integrated into models to make inferences on how environmental parameters ...

2021

Cytotoxicity, Accumulation and Translocation of Silver and Silver Sulfide Nanoparticles in contact with Rainbow Trout Intestinal Cells

Kristin Schirmer, Laura Sigg

Silver nanoparticles (Ag NPs) are widely used in consumer products especially because of their antimicrobial properties. However, this wide usage of Ag NPs is accompanied by their release into the environment where they will be rapidly transformed to other ...

ELSEVIER2021

PDMS filter structures for size-dependent larval sorting and on-chip egg extraction of C. elegans

Martinus Gijs, Hüseyin Baris Atakan, Furkan Ayhan

C. elegans-based assays require age-synchronized populations prior to experimentation to achieve standardized sets of worm populations, due to which age-induced heterogeneous phenotyping effects can be avoided. There have been several approaches to synchro ...

ROYAL SOC CHEMISTRY2020

Legacy and alternative halogenated flame retardants in Lake Geneva fish

Benoît Jean Dominique Ferrari

Legacy (i.e., polybrominated diphenyl ethers (PBDEs) and hexabromocyclododecane (HBCDD)) and alternative halogenated flame retardants (HFRs) were analyzed in 31 whole fish samples from Lake Geneva in 2018. Two fish species, namely, the burbot (Lota lota) a ...

2021

Ligand Binding to the Collagen VI Receptor Triggers a Talin-to-RhoA Switch that Regulates Receptor Endocytosis

Françoise Gisou van der Goot Grunberg, Matteo Dal Peraro, Laurence Gouzi Abrami, Luciano Andres Abriata, Béatrice Kunz, Shixu Yan

Capillary morphogenesis gene 2 (CMG2/ANTXR2) is a cell surface receptor for both collagen VI and anthrax toxin. Biallelic loss-of-function mutations in CMG2 lead to a severe condition, hyaline fibromatosis syndrome (HFS). We have here dissected a network o ...

Cell Press - Elsevier2020

A fish intestinal barrier model to assess the interaction with chemicals in vitro

Hannah Inka Schug

The intestinal epithelium acts as vital gate keeper between the fish and its surrounding environment. A single layer of connected epithelial cells forms a selective barrier, which, among other essential functions, is important for nutrient uptake and defen ...

EPFL2019

Improving a fish intestinal barrier model by combining two rainbow trout cell lines: epithelial RTgutGC and fibroblastic RTgutF

Philippe Renaud, Kristin Schirmer, Carolin Drieschner, Hannah Inka Schug

An in vitro model of the fish intestine is of interest for research and application in diverse fields such as fish physiology, aquaculture and chemical risk assessment. The recently developed epithelial barrier model of the fish intestine relies on the RTg ...

Springer2019

Imidacloprid induces adverse effects on fish early life stages that are more severe in Japanese medaka (Oryzias latipes) than in zebrafish (Danio rerio)

Kristin Schirmer, Juliane Hollender

Neonicotinoids are widely used insecticides that have frequently been found in freshwater with concentrations ranging from ng to mu g/L. It is known that these compounds impact non-target invertebrates, such as bees and gammaridae, in terms of toxicity and ...

Pergamon-Elsevier Science Ltd2019

Design of a modular robotic system that mimics small fish locomotion and body movements for ethological studies

Francesco Mondada, Alexey Gribovskiy, Frank Bonnet, Bertrand Eric Collignon

Robotic animals are nowadays developed for various types of research, such as bioinspired robotics, biomimetics, and animal behavioral studies. The design of these robots poses great challenges as they often have to achieve very high-level performances in ...

Sciyo2017

Collision-Free Pattern Formation

Rachid Guerraoui, Alexandre David Olivier Maurer

Shoals of small fishes can change their collective shape and form a specific pattern. They do so efficiently (in parallel) and without collision. In this paper, we study the analog problem of distributed pattern formation. A set of processes needs to move ...

2016

Transient response of Salix cuttings to changing water level regimes

Alexandre Buttler, Paolo Perona, Pascal Turberg, Constant Signarbieux, Lorenzo Gorla

Sustainable water management requires an understanding of the effects of flow regulation on riparian ecomorphological processes. We investigated the transient response of Salix viminalis by examining the effect of water-level regimes on its above-ground an ...

American Geophysical Union2015

Mechanosensory interactions drive collective behaviour in Drosophila

Dario Floreano, Pavan P Ramdya, Pawel Lichocki, Lukas Frisch, Winnie Wing Yee Tse

Collective behaviour enhances environmental sensing and decision-making in groups of animals. Experimental and theoretical investigations of schooling fish, flocking birds and human crowds have demonstrated that simple interactions between individuals can ...

2015

Investigating Alternatives To The Fish Early-Life Stage Test: A Strategy For Discovering And Annotating Adverse Outcome Pathways For Early Fish Development

Kristin Schirmer

The fish early-life stage (FELS) test (Organisation for Economic Co-operation and Development [OECD] test guideline 210) is the primary test used internationally to estimate chronic fish toxicity in support of ecological risk assessments and chemical manag ...

Wiley-Blackwell2014

Predicting Adult Fish Acute Lethality with the Zebrafish Embryo: Relevance of Test Duration, Endpoints, Compound Properties, and Exposure Concentration Analysis

Kristin Schirmer

The zebrafish embryo toxicity test has been proposed as an alternative for the acute fish toxicity test, which is required by various regulations for environmental risk assessment of chemicals. We. investigated the reliability of the embryo test by probing ...

Amer Chemical Soc2012

Characterization of pip5k3 fleck corneal dystrophy-linked gene in zebrafish

PIKfyve is a kinase encoded by pip5k3 involved in phosphatidylinositols (PdtIns) pathways. These lipids building cell membranes have structural functions and are involved in complex intracellular regulations. Mutations in human PIP5K3 are associated with F ...

2008