Lectures related to Gene expression profiling

Bulk Transcriptome Analysis: RNA-seq Workflow and Gene Expression Analysis

Explains transcriptomics, RNA-seq workflow, and gene expression analysis for disease biomarkers.

Single-cell and Spatially Resolved RNA-seq

Explores single-cell RNA-seq, tissue dissociation, capture methods, and differential gene expression analysis.

Gene Expression: Introduction and Data Analysis

Covers gene expression data quantification, genome analysis, and large-scale studies.

Methods to Identify Transcriptomic Types

Covers methods to identify transcriptomic types and classify bipolar cells using computational techniques and molecular profiling.

Using AGEA in the Allen Mouse Brain Atlas

Introduces the Anatomic Gene Expression Atlas (AGEA) for exploring gene expression patterns in the mouse brain.

Combining profiles: Electrical, Morphological, Molecular

Covers combining electrical, morphological, and molecular profiles to study single neurons.

How to Interpret Gene Expression Heat Maps

Offers a tutorial on interpreting gene expression heat maps from the Allen Institute.

Single-cell Temporal-Omics: Inference of Transcriptional Dynamics

On Single-cell Temporal-Omics explores inferring transcriptional dynamics from snapshot data and interpreting RNA velocity in RNA metabolism.

Transgenic Mice: Cre-Lines and Optogenetics

Covers transgenic mice using Cre-lines and optogenetics, exploring neural cell manipulation techniques and brain region-specific gene expression.

The Molecules of Life: Nucleic Acids

Covers the structure and functions of nucleic acids, including genetic information storage and gene expression.

Neuronal Densities: Molecular Profiling

Explores molecular profiling for determining neuronal densities and the correlation with reconstructed circuits.

Early Life Modulators of Aging and Age-Associated Diseases

Delves into the effects of early-life oxidative stress on lifespan and age-related diseases in C. elegans.

BrainSpan Atlas of Developing Human Brain

Covers the BrainSpan Atlas, mapping gene expression in the developing human brain.

Single cell RNA-sequencing: Methods and Data Analysis

Covers the process of single cell RNA-sequencing and clustering data.

NGS Data Analysis: Tools and Models

Explores tools and models for Next-Generation Sequencing data analysis, covering DNA sequencing technologies, data analysis pipelines, and statistical models.

The Allen Institute Mouse Brain Data

Explores the Allen Institute Mouse Brain data collection and development processes.

Data available from the Allen human brain atlases

Covers the data available from the Allen human brain atlases, including gene expression analysis and the BrainSpan Atlas.

Characterizing Cell Types

Explores characterizing cell types based on various modalities and the evolving field of single-cell RNA sequencing in neuroscience.

Genomic Regulation and Personalized Medicine

Explores chromatin loops, gene expression regulation, personalized medicine, and genomic variations.

Tissue-level Wave Patterns: Cellular Oscillators and Genetic Waves

Explores tissue-level wave patterns, cellular oscillators, genetic waves, and gene expression patterns in cellular differentiation.