Lectures related to Quantile Normalization in Genomics

Genomic Data Analysis: Techniques and Applications

Covers gene expression measurement techniques and analysis methods in genomics.

Data available from the Allen human brain atlases

Covers the data available from the Allen human brain atlases, including gene expression analysis and the BrainSpan Atlas.

Single-cell and Spatially Resolved RNA-seq

Explores single-cell RNA-seq, tissue dissociation, capture methods, and differential gene expression analysis.

NGS Data Analysis: Tools and Models

Explores tools and models for Next-Generation Sequencing data analysis, covering DNA sequencing technologies, data analysis pipelines, and statistical models.

Single Cell mRNA Sequencing

Explores the Drop Seq method for single-cell mRNA sequencing and compares it with RNA Microarray.

Bulk Transcriptome Analysis: RNA-seq Workflow and Gene Expression Analysis

Explains transcriptomics, RNA-seq workflow, and gene expression analysis for disease biomarkers.

Genomic Data Analysis: Microarray Technology

Explores microarray technology for genomic data analysis, covering Affymetrix GeneChip Probe Arrays, data preprocessing, normalization, differential expression analysis, and method comparisons.

DNA: PCR and Sequencing Techniques

Explores DNA engineering through PCR, Sanger sequencing, the Human Genome Project, recombinant DNA, bacterial DNA manipulation, and CRISPR/Cas9.

Transgenic Mice: Cre-Lines and Optogenetics

Covers transgenic mice using Cre-lines and optogenetics, exploring neural cell manipulation techniques and brain region-specific gene expression.

Genomic Regulation and Personalized Medicine

Explores chromatin loops, gene expression regulation, personalized medicine, and genomic variations.

Single cell RNA-sequencing: Methods and Data Analysis

Covers the process of single cell RNA-sequencing and clustering data.

Genomics: Gene Regulatory Networks

Explores gene regulatory networks, protein-DNA interactions, and regulatory elements in genomics.

Understanding Cancer Genomics

Explores the revolution in cancer genomics, sequencing technologies, gene expression influence, and sequencing methods.

Robust Regression in Genomic Data Analysis

Explores robust regression in genomic data analysis, focusing on downweighting large residuals for improved estimation accuracy and quality assessment metrics like NUSE and RLE.

The Molecules of Life: Nucleic Acids

Covers the structure and functions of nucleic acids, including genetic information storage and gene expression.

The Allen Institute Mouse Brain Data

Explores the Allen Institute Mouse Brain data collection and development processes.

Gene Expression: Introduction and Data Analysis

Covers gene expression data quantification, genome analysis, and large-scale studies.

Regulatory Variation & Precision Medicine

Explores regulatory variation's impact on precision medicine, focusing on non-coding GWAS SNPs and gene expression variation.

Genetic Circuits: Synthetic Biology

Explores genetic circuits design in synthetic biology, from regulatory mechanisms to plasmid construction.

Ribosome Profiling: Techniques and Applications

Explores ribosome profiling techniques, chemical applications, and translational insights in gene-specific features and behavioral responses.