Covers the basics of molecular dynamics simulations, ensemble properties, classical mechanics formulations, numerical integration, energy conservation, and constraint algorithms.
Explores the quasi-stationary distribution approach in molecular dynamics modeling, covering Langevin dynamics, metastability, and kinetic Monte Carlo models.
Explores the microcanonical and canonical ensembles, historical contributions, macrostates, microstates, and particle arrangements in statistical thermodynamics.
Explores Monte Carlo techniques for sampling and simulation, covering integration, importance sampling, ergodicity, equilibration, and Metropolis acceptance.
