Publications by Régis Lionel Vivien

New Data on the Use of Oligochaete Communities for Assessing the Impacts of Wastewater Treatment Plant Effluents on Receiving Streams

Benoît Jean Dominique Ferrari, Régis Lionel Vivien

Negative impacts of human activities on stream ecosystems include the reduction/modification of the connectivity between surface water and groundwater and the contamination of these resources. Vertical hydrological exchanges principally occur through the c ...

MDPI AG2025

Évaluation des effets de l’augmentation des débits réservés à l’aval de deux barrages du Haut-Rhône français à l’aide de l’examen des communautés d’oligochètes

Régis Lionel Vivien

Des travaux de restauration du chenal central du Haut-Rhône français à l’aval des barrages de Lavours et Champagneux ont été entrepris en 2005-2006 et ont consisté à augmenter les débits réservés. Les effets de cette opération ont été évalués en étudiant e ...

2021

The foreign oligochaete species Quistadrilus multisetosus (Smith, 1900) in Lake Geneva: morphological and molecular characterization and environmental influences on its distribution

Benoît Jean Dominique Ferrari, Régis Lionel Vivien

The presence of the oligochaete species Quistadrilus multisetosus (Smith, 1900) originating from North America has been mentioned for several decades in Europe, the Middle East and Russia. Its distribution and abundance in Europe is still unknown but it ca ...

2020

Effect thresholds of metals in stream sediments based on in situ oligochaete communities

Maria del Carmen Casado Martinez, Benoît Jean Dominique Ferrari, Régis Lionel Vivien

Aquatic oligochaetes, comprising a large number of species showing various degrees of resistance to chemical pollution, are recognized as valuable bioindicators of sediments’ quality. In the Geneva area (Switzerland), oligochaete tools were previously test ...

2020

High-throughput DNA barcoding of oligochaetes for abundance-based indices to assess the biological quality of sediments in streams and lakes

Benoît Jean Dominique Ferrari, Régis Lionel Vivien

Aquatic oligochaete communities are valuable indicators of the biological quality of sediments in streams and lakes, but identification of specimens to the species level based on morphological features requires solid expertise in taxonomy and is possible o ...

Nature Research2020

Assessment of abundance and community composition of benthic macroinvertebrates: recommendations for improved sampling, fixation and extraction of oligochaetes

Benoît Jean Dominique Ferrari, Régis Lionel Vivien

For several decades, the abundance and community structure of benthic macroinvertebrates have been studied to assess the biological quality of aquatic ecosystems. Procedures aiming at studying the whole of macroinvertebrate communities were mainly designed ...

2020

Testing diﬀerent (e)DNA metabarcoding approaches to assess aquatic oligochaete diversity and the biological quality of sediments

Régis Lionel Vivien

Aquatic oligochaetes are important bioindicators of sediment quality in watercourses and lakes, but their morphological identiﬁcation to the species level is challenging and sometimes impossible. The use of DNA barcoding and metabarcoding could greatly fac ...

2019

Assessment of the effects of wastewater treatment plant effluents on receiving streams using oligochaete communities of the porous matrix

Régis Lionel Vivien

Human activities can disturb the natural dynamics of exchanges between surface water and groundwater in rivers. Such exchanges contribute to the self-purification of the environment and an excess of infiltration can lead to contamination of groundwater. In ...

2019

Simultaneous preservation of the DNA quality, the community composition and the density of freshwater oligochaetes for the development of genetically based biological indices

Régis Lionel Vivien

Introduction. Oligochaetes are recognized as valuable bioindicators of sediment quality in streams and lakes. The development of an oligochaete index based on the identification of specimens using DNA barcodes requires a method for simultaneously preservin ...

2018

Development and implementation of eco-genomic tools for aquatic ecosystem biomonitoring: the SYNAQUA French-Swiss program

Régis Lionel Vivien

The effectiveness of environmental protection measures is based on the early identification and diagnosis of anthropogenic pressures. Similarly, restoration actions require precise monitoring of changes in the ecological quality of ecosystems, in order to ...

SPRINGER HEIDELBERG2018

Cytochrome c oxidase barcodes for aquatic oligochaete identification: development of a Swiss reference database

Régis Lionel Vivien

Introduction. Aquatic oligochaetes represent valuable indicators of the quality of sediments of watercourses and lakes, but their difficult identification based on morphological criteria compromises their more common use for eco-diagnostic analyses. This i ...

Peerj Inc2017

DNA barcoding of formalin‑fixed aquatic oligochaetes for biomonitoring

Régis Lionel Vivien

Background: Oligochaetes are valuable bioindicators of the quality of watercourse and lake sediments. The morphological identification of aquatic oligochaetes is difficult, prompting the development of new molecular oligochaete indices based on DNA barcodi ...

2016

Utilisation des communautés d’oligochètes pour l’évaluation de la qualité biologique et du fonctionnement des cours d’eau : un bilan à partir de données genevoises (Suisse)

Régis Lionel Vivien

Use of oligochaete communities for the assessment of the biological quality and the functioning of watercourses : a review of data from the Geneva area (Switzerland). – Oligochaetes are used in some cantons in Switzerland to assess the biological quality o ...

2015