Publications related to As release under the microbial sulfate reduction during redox oscillations in the upper Mekong delta aquifers, Vietnam: A mechanistic study

Nature-based solution enhances resilience to flooding and catalyzes multi-benefits in coastal cities in the Global South

Jérôme Chenal, Paolo Perona, Charlotte Grossiord, Montana Marshall, Emmanuel Qays Dubois

Coastal cities are facing a rise in groundwater levels induced by sea level rise, further triggering saturation excess flooding where groundwater levels reach the topographic surface or reduce the storage capacity of the soil, thus stressing the existing i ...

2024

Contribution of standardized indexes to understand groundwater level fluctuations in response to meteorological conditions in cold and humid climates

Emmanuel Qays Dubois

Understanding the fluctuations in groundwater levels in response to meteorological conditions is challenging, especially given the slow transit time associated with groundwater reservoirs and the short duration of time series for groundwater levels. Nevert ...

2024

Spatially Explicit Linkages Between Redox Potential Cycles and Soil Moisture Fluctuations

Rizlan Bernier-Latmani, Manon Frutschi, Andrea Rinaldo, Paolo Benettin, Mitra Asadollahi, Simiao Wang, Filippo Miele

Reduction-oxidation cycles measured through soil redox potential (Eh) are associated with dynamic soil microbial activity. Understanding changes in the composition of, and resource use by, soil microbial communities requires Eh predictability under shiftin ...

American Geophysical Union2023

Genomic insights into the coupling of a Chlorella-like microeukaryote and sulfur bacteria in the chemocline of permanently stratified Lake Cadagno

Christel Sybille Hassler

Meromictic Lake Cadagno is a permanently stratified system with a persistent microbial bloom within the oxic-anoxic boundary called the chemocline. The association between oxygenic and anoxygenic photosynthesis within the chemocline has been known for at l ...

SPRINGERNATURE2023

Sulfur-cycling chemolithoautotrophic microbial community dominates a cold, anoxic, hypersaline Arctic spring

Ianina Altshuler

Background Gypsum Hill Spring, located in Nunavut in the Canadian High Arctic, is a rare example of a cold saline spring arising through thick permafrost. It perennially discharges cold (similar to 7 degrees C), hypersaline (7-8% salinity), anoxic (similar ...

BMC2023

Proteome adaptations of the organohalide-respiring Desulfitobacterium hafniense strain DCB-2 to various energy metabolisms

Christof Holliger, Julien Maillard, Florence Armand, Romain Hamelin, Mathilde Stéphanie Willemin

IntroductionDesulfitobacterium hafniense was isolated for its ability to use organohalogens as terminal electron acceptors via organohalide respiration (OHR). In contrast to obligate OHR bacteria, Desulfitobacterium spp. show a highly versatile energy meta ...

Frontiers Media SA2023

Active lithoautotrophic and methane-oxidizing microbial community in an anoxic, sub-zero, and hypersaline High Arctic spring

Ianina Altshuler

Lost Hammer Spring, located in the High Arctic of Nunavut, Canada, is one of the coldest and saltiest terrestrial springs discovered to date. It perennially discharges anoxic (

2022

Applying the Principal Component Analysis for a deeper understanding of the groundwater system: case study of the Bacchiglione Basin (Veneto, Italy)

Andrea Rinaldo

In hydrogeology, it is often difficult to fully understand the hydraulic factors affecting the recharge of groundwater systems. Particularly, at a regional scale, the groundwater system can have different drivers depending on the considered area, i.e., soi ...

PAGEPRESS PUBL2022

Active anaerobic methane oxidation and sulfur disproportionation in the deep terrestrial subsurface

Rizlan Bernier-Latmani, Manon Frutschi, Emma Bell, Chen Qian

Microbial life is widespread in the terrestrial subsurface and present down to several kilometers depth, but the energy sources that fuel metabolism in deep oligotrophic and anoxic environments remain unclear. In the deep crystalline bedrock of the Fennosc ...

2022

Meta-omics-aided isolation of an elusive anaerobic arsenic-methylating soil bacterium

Rizlan Bernier-Latmani, Karen Elda Viacava Romo, Karin Lederballe Meibom, Matthew Charles Reid, Nicolas Louis Maurice Jacquemin, Jiangtao Qiao

Soil microbiomes harbor unparalleled functional and phylogenetic diversity and are sources of novel metabolisms. However, extracting isolates with a targeted function from complex microbiomes is not straightforward, particularly if the associated phenotype ...

2022

Presence of algal symbionts affects denitrifying bacterial communities in the sea anemone Aiptasia coral model

Anders Meibom, Nils Rädecker, Claudia Isabella Pogoreutz

The coral-algal symbiosis is maintained by a constant and limited nitrogen availability in the holobiont. Denitrifiers, i.e., prokaryotes reducing nitrate/nitrite to dinitrogen, could contribute to maintaining the nitrogen limitation in the coral holobiont ...

2022

Insights into the microbial reduction of pentavalent and hexavalent uranium species by Shewanella oneidensis MR-1

Margaux Camille Andréa Molinas

Decades of uranium-related activities such as ore mining, nuclear power generation, weapon manufacture, storage of nuclear wastes, have contributed to the release of U in the environment. U occurrence is concerning, since in surface environments, U is typi ...

EPFL2021

Energy efficiency and biological interactions define the core microbiome of deep oligotrophic groundwater

Rizlan Bernier-Latmani, Emma Bell

While oligotrophic deep groundwaters host active microbes attuned to the low-end of the bioenergetics spectrum, the ecological constraints on microbial niches in these ecosystems and their consequences for microbiome convergence are unknown. Here, we provi ...

Nature Research2021

Luminescent, porous, metal-organic crystals: Design, synthesis, and applications

Fatmah Ebrahim

The work presented in this thesis is focused on the design and discovery of new luminescent, porous, crystalline materials for targeted applications. In particular, we focus on luminescent Metal-Organic Frameworks (MOFs) and Organic Molecules of Intrinsic ...

EPFL2020

Coupled As and Mn Redox Transformations in an Fe(0) Electrocoagulation System: Competition for Reactive Oxidants and Sorption Sites

Sachiko Hirosue, Jasquelin Peña, Nathalie Manetti, Victor Carle Adrien Boureau

Iron electrocoagulation (EC) can be used for the decentralized treatment of arsenic(As)-contaminated groundwater. Iron EC involves the electrolytic dissolution of an Fe(0) electrode to Fe(II). This process produces reactive oxidants, which oxidize As(III) ...

AMER CHEMICAL SOC2020

Impact of iron- and/or sulfate-reduction on a cis-1,2-dichloroethene and vinyl chloride respiring bacterial consortium: experiments and model-based interpretation

Christof Holliger, Julien Maillard, Alexandra Marie Murray

Process understanding of microbial communities containing organohalide-respiring bacteria (OHRB) is important for effective bioremediation of chlorinated ethenes. The impact of iron and sulfate reduction on cis-1,2-dichloroethene (cDCE) and vinyl chloride ...

ROYAL SOC CHEMISTRY2020

Methylation of arsenic by single-species and soil-derived microbial cultures

Karen Elda Viacava Romo

Arsenic (As) is simultaneously a ubiquitous and a toxic element. Arsenic is subject to bio-transformations catalyzed by microorganisms constituting the As biogeochemical cycle. The primordial Earth was devoid of oxygen, exposing life to the highly mobile a ...

EPFL2020

Transport of zinc ions in the hyporheic zone: Experiments and simulations

David Andrew Barry

Large amounts of toxic metals are discharged into rivers and lakes, but little is known about the factors that drive the adsorption and transformation of these metals in the hyporheic zone and the exchange flux across the sediment-water interface. To bette ...

2020

In Situ Biostimulation of Cr(VI) Reduction in a Fast-Flowing Oxic Aquifer

Rizlan Bernier-Latmani, Daniel Scott Alessi

Hexavalent chromium is among the most common and hazardous inorganic contaminants in soils and groundwater. A promising in situ bioremediation approach is the delivery of electron donors to stimulate microbially mediated Cr(VI) reduction, producing relativ ...

AMER CHEMICAL SOC2020

Evaluation of materials for iodine and technetium immobilization through sorption and redox-driven processes

Daniel Teav Sun, Wendy Lee Queen

Radioactive iodine-129 (I-129) and technetium-99 (Tc-9(9)) pose a risk to groundwater due to their long half-lives, toxicity, and high environmental mobility. Based on literature reviewed in Moore et al. (2019) and Pearce et aL (2019), natural and engineer ...

ELSEVIER2020