MutationIn biology, a mutation is an alteration in the nucleic acid sequence of the genome of an organism, virus, or extrachromosomal DNA. Viral genomes contain either DNA or RNA. Mutations result from errors during DNA or viral replication, mitosis, or meiosis or other types of damage to DNA (such as pyrimidine dimers caused by exposure to ultraviolet radiation), which then may undergo error-prone repair (especially microhomology-mediated end joining), cause an error during other forms of repair, or cause an error during replication (translesion synthesis).
RING finger domainIn molecular biology, a RING (short for Really Interesting New Gene) finger domain is a protein structural domain of zinc finger type which contains a C3HC4 amino acid motif which binds two zinc cations (seven cysteines and one histidine arranged non-consecutively). This protein domain contains 40 to 60 amino acids. Many proteins containing a RING finger play a key role in the ubiquitination pathway.
Integral domainIn mathematics, specifically abstract algebra, an integral domain is a nonzero commutative ring in which the product of any two nonzero elements is nonzero. Integral domains are generalizations of the ring of integers and provide a natural setting for studying divisibility. In an integral domain, every nonzero element a has the cancellation property, that is, if a ≠ 0, an equality ab = ac implies b = c. "Integral domain" is defined almost universally as above, but there is some variation.
UbiquitinUbiquitin is a small (8.6 kDa) regulatory protein found in most tissues of eukaryotic organisms, i.e., it is found ubiquitously. It was discovered in 1975 by Gideon Goldstein and further characterized throughout the late 1970s and 1980s. Four genes in the human genome code for ubiquitin: UBB, UBC, UBA52 and RPS27A. The addition of ubiquitin to a substrate protein is called ubiquitylation (or, alternatively, ubiquitination or ubiquitinylation).
Dedekind domainIn abstract algebra, a Dedekind domain or Dedekind ring, named after Richard Dedekind, is an integral domain in which every nonzero proper ideal factors into a product of prime ideals. It can be shown that such a factorization is then necessarily unique up to the order of the factors. There are at least three other characterizations of Dedekind domains that are sometimes taken as the definition: see below. A field is a commutative ring in which there are no nontrivial proper ideals, so that any field is a Dedekind domain, however in a rather vacuous way.
Mutation rateIn genetics, the mutation rate is the frequency of new mutations in a single gene or organism over time. Mutation rates are not constant and are not limited to a single type of mutation; there are many different types of mutations. Mutation rates are given for specific classes of mutations. Point mutations are a class of mutations which are changes to a single base. Missense and Nonsense mutations are two subtypes of point mutations.
Prüfer domainIn mathematics, a Prüfer domain is a type of commutative ring that generalizes Dedekind domains in a non-Noetherian context. These rings possess the nice ideal and module theoretic properties of Dedekind domains, but usually only for finitely generated modules. Prüfer domains are named after the German mathematician Heinz Prüfer. The ring of entire functions on the open complex plane form a Prüfer domain. The ring of integer valued polynomials with rational coefficients is a Prüfer domain, although the ring of integer polynomials is not .
Ubiquitin ligaseA ubiquitin ligase (also called an E3 ubiquitin ligase) is a protein that recruits an E2 ubiquitin-conjugating enzyme that has been loaded with ubiquitin, recognizes a protein substrate, and assists or directly catalyzes the transfer of ubiquitin from the E2 to the protein substrate. In simple and more general terms, the ligase enables movement of ubiquitin from a ubiquitin carrier to another thing (the substrate) by some mechanism. The ubiquitin, once it reaches its destination, ends up being attached by an isopeptide bond to a lysine residue, which is part of the target protein.
Unique factorization domainIn mathematics, a unique factorization domain (UFD) (also sometimes called a factorial ring following the terminology of Bourbaki) is a ring in which a statement analogous to the fundamental theorem of arithmetic holds. Specifically, a UFD is an integral domain (a nontrivial commutative ring in which the product of any two non-zero elements is non-zero) in which every non-zero non-unit element can be written as a product of prime elements (or irreducible elements), uniquely up to order and units.
Frameshift mutationA frameshift mutation (also called a framing error or a reading frame shift) is a genetic mutation caused by indels (insertions or deletions) of a number of nucleotides in a DNA sequence that is not divisible by three. Due to the triplet nature of gene expression by codons, the insertion or deletion can change the reading frame (the grouping of the codons), resulting in a completely different translation from the original. The earlier in the sequence the deletion or insertion occurs, the more altered the protein.
Domain (ring theory)In algebra, a domain is a nonzero ring in which ab = 0 implies a = 0 or b = 0. (Sometimes such a ring is said to "have the zero-product property".) Equivalently, a domain is a ring in which 0 is the only left zero divisor (or equivalently, the only right zero divisor). A commutative domain is called an integral domain. Mathematical literature contains multiple variants of the definition of "domain". The ring is not a domain, because the images of 2 and 3 in this ring are nonzero elements with product 0.
Principal ideal domainIn mathematics, a principal ideal domain, or PID, is an integral domain in which every ideal is principal, i.e., can be generated by a single element. More generally, a principal ideal ring is a nonzero commutative ring whose ideals are principal, although some authors (e.g., Bourbaki) refer to PIDs as principal rings. The distinction is that a principal ideal ring may have zero divisors whereas a principal ideal domain cannot.
Noetherian ringIn mathematics, a Noetherian ring is a ring that satisfies the ascending chain condition on left and right ideals; if the chain condition is satisfied only for left ideals or for right ideals, then the ring is said left-Noetherian or right-Noetherian respectively. That is, every increasing sequence of left (or right) ideals has a largest element; that is, there exists an n such that: Equivalently, a ring is left-Noetherian (resp. right-Noetherian) if every left ideal (resp. right-ideal) is finitely generated.
Atomic domainIn mathematics, more specifically ring theory, an atomic domain or factorization domain is an integral domain in which every non-zero non-unit can be written in at least one way as a finite product of irreducible elements. Atomic domains are different from unique factorization domains in that this decomposition of an element into irreducibles need not be unique; stated differently, an irreducible element is not necessarily a prime element. Important examples of atomic domains include the class of all unique factorization domains and all Noetherian domains.
Functional analysisFunctional analysis is a branch of mathematical analysis, the core of which is formed by the study of vector spaces endowed with some kind of limit-related structure (for example, inner product, norm, or topology) and the linear functions defined on these spaces and suitably respecting these structures. The historical roots of functional analysis lie in the study of spaces of functions and the formulation of properties of transformations of functions such as the Fourier transform as transformations defining, for example, continuous or unitary operators between function spaces.
Point mutationA point mutation is a genetic mutation where a single nucleotide base is changed, inserted or deleted from a DNA or RNA sequence of an organism's genome. Point mutations have a variety of effects on the downstream protein product—consequences that are moderately predictable based upon the specifics of the mutation. These consequences can range from no effect (e.g. synonymous mutations) to deleterious effects (e.g. frameshift mutations), with regard to protein production, composition, and function.
DiseaseA disease is a particular abnormal condition that negatively affects the structure or function of all or part of an organism and is not immediately due to any external injury. Diseases are often known to be medical conditions that are associated with specific signs and symptoms. A disease may be caused by external factors such as pathogens or by internal dysfunctions. For example, internal dysfunctions of the immune system can produce a variety of different diseases, including various forms of immunodeficiency, hypersensitivity, allergies, and autoimmune disorders.
MutationismMutationism is one of several alternatives to evolution by natural selection that have existed both before and after the publication of Charles Darwin's 1859 book On the Origin of Species. In the theory, mutation was the source of novelty, creating new forms and new species, potentially instantaneously, in sudden jumps. This was envisaged as driving evolution, which was thought to be limited by the supply of mutations. Before Darwin, biologists commonly believed in saltationism, the possibility of large evolutionary jumps, including immediate speciation.
Anaphase-promoting complexAnaphase-promoting complex (also called the cyclosome or APC/C) is an E3 ubiquitin ligase that marks target cell cycle proteins for degradation by the 26S proteasome. The APC/C is a large complex of 11–13 subunit proteins, including a cullin (Apc2) and RING (Apc11) subunit much like SCF. Other parts of the APC/C have unknown functions but are highly conserved. It was the discovery of the APC/C (and SCF) and their key role in eukaryotic cell-cycle regulation that established the importance of ubiquitin-mediated proteolysis in cell biology.
Schwann cellSchwann cells or neurolemmocytes (named after German physiologist Theodor Schwann) are the principal glia of the peripheral nervous system (PNS). Glial cells function to support neurons and in the PNS, also include satellite cells, olfactory ensheathing cells, enteric glia and glia that reside at sensory nerve endings, such as the Pacinian corpuscle. The two types of Schwann cells are myelinating and nonmyelinating. Myelinating Schwann cells wrap around axons of motor and sensory neurons to form the myelin sheath.
