Publications related to Neural Annotation Refinement: Development of a New 3D Dataset for Adrenal Gland Analysis

Modular segmentation, spatial analysis and visualization of volume electron microscopy datasets

Volume electron microscopy is the method of choice for the in situ interrogation of cellular ultrastructure at the nanometer scale, and with the increase in large raw image datasets generated, improving computational strategies for image segmentation and s ...

Nature Portfolio2024

Lotic-SIPCO2: Adaptation of an open-source CO2 sensor system and examination of associated emission uncertainties across a range of stream sizes and land uses

Andrew Lean Robison

River networks play a crucial role in the global carbon cycle, as relevant sources of carbon dioxide (CO2) to the atmosphere. Advancements in high-frequency monitoring in aquatic environments have enabled measurement of dissolved CO2 concentration at tempo ...

Association for the Sciences of Limnology and Oceanography (ASLO)2024

Technology-Aware Logic Synthesis for Superconducting Electronics

Giovanni De Micheli, Dewmini Sudara Marakkalage, Siang-Yun Lee, Alessandro Tempia Calvino, Mingfei Yu, Rassul Bairamkulov

Superconducting electronics provide us with cryogenic digital circuits that can rival established technologies in performance and energy consumption. Today, the lack of tools for the design of large-scale integrated superconducting circuits is a major obst ...

2024

Aggregating Spatial and Photometric Context for Photometric Stereo

David Honzátko

Photometric stereo, a computer vision technique for estimating the 3D shape of objects through images captured under varying illumination conditions, has been a topic of research for nearly four decades. In its general formulation, photometric stereo is an ...

EPFL2024

Projector-based augmented stacking framework for irregularly shaped objects

Yves Weinand, Katrin Beyer, Julien Gamerro, Andrea Settimi, Qianqing Wang, Edward Carlo Giorgio Andò

Augmented reality in additive fabrication is predominantly applied to the manufacturing of structures from regularly shaped materials. Our work however embraces natural heterogeneity, by focusing on the assembly of irregularly shaped elements such as miner ...

2023

Multiparty Homomorphic Encryption: from Theory to Practice

Christian Vincent Mouchet

Multiparty homomorphic encryption (MHE) enables a group of parties to encrypt data in a way that (i) enables the evaluation of functions directly over its ciphertexts and (ii) enforces a joint cryptographic access-control over the underlying data. By exten ...

EPFL2023

Scale-Aware Test-Time Click Adaptation for Pulmonary Nodule and Mass Segmentation

Bo Du, Li Zhang, Zhigang Li, Jiancheng Yang

Pulmonary nodules and masses are crucial imaging features in lung cancer screening that require careful management in clinical diagnosis. Despite the success of deep learning-based medical image segmentation, the robust performance on various sizes of lesi ...

Springer International Publishing Ag2023

Practical Implementations of Remote Power Side-Channel and Fault-Injection Attacks on Multitenant FPGAs

Francesco Regazzoni, Mirjana Stojilovic, Ognjen Glamocanin, Dina Gamaleldin Ahmed Shawky Mahmoud

Cloud computing environments increasingly provision FPGAs because of their fine-grained, highly parallel, and flexible hardware architecture. The availability of FPGAs in the cloud fueled research on the security risks associated with exposing FPGA fabric ...

Springer, Cham2023

Machine-Learning-Enhanced Procedural Modeling for 4D Historical Cities Reconstruction

Frédéric Kaplan, Isabella Di Lenardo, Rémi Guillaume Petitpierre, Beatrice Vaienti

The generation of 3D models depicting cities in the past holds great potential for documentation and educational purposes. However, it is often hindered by incomplete historical data and the specialized expertise required. To address these challenges, we p ...

2023

Advancing atomic force microscopy through open source instrumentation

Mustafa Kangül

Atomic force microscopy (AFM), a member of the scanning probe microscopy (SPM) family, holds a unique position as a nano-characterization instrument in the fields of physics, chemistry, and biology. Its ability to provide atomic resolution and operate in v ...

EPFL2023

Motor-Unit Ordering of Blindly-Separated Surface-EMG Signals for Gesture Recognition

Elisa Donati, Pasquale Davide Schiavone

Hand gestures are one of the most natural and expressive way for humans to convey information, and thus hand gesture recognition has become a research hotspot in the human-machine interface (HMI) field. In particular, biological signals such as surface ele ...

SPRINGER INTERNATIONAL PUBLISHING AG2023

Deep Generative Models for Autonomous Driving: from Motion Forecasting to Realistic Image Synthesis

Saeed Saadatnejad

Forecasting is a capability inherent in humans when navigating. Humans routinely plan their paths, considering the potential future movements of those around them. Similarly, to achieve comparable sophistication and safety, autonomous systems must embrace ...

EPFL2023

Cybersickness assessment framework(CSAF): An Open Source Repository for Standardized Cybersickness Experiments

Ronan Boulic, Nana Tian, Adriano Viegas Milani

Studies of cybersickness (CS) often require a significant invest- ment in creating the primary VR environment and other experiment- related features. In addition, minor differences in VR content in independent studies may lead to opposite results. This mot ...

IEEE2023

Multi-site, Multi-domain Airway Tree Modeling

Boyu Zhang, Jiancheng Yang, Ying Zhu, Yi Wu

Open international challenges are becoming the de facto standard for assessing computer vision and image analysis algorithms. In recent years, new methods have extended the reach of pulmonary airway segmentation that is closer to the limit of image resolut ...

Elsevier2023

Blue Brain Nexus: An open, secure, scalable system for knowledge graph management and data-driven science

Henry Markram, Henry Genet, Alejandra Garcia Rojas Martinez, Sean Lewis Hill, Huanxiang Lu, Mohameth François Sy, Samuel Claude Kerrien, Michaël Fernand Paul Dupont, Silvia Rosario Jimenez Tejeda, Bogdan Roman, Ian Lavriushev, Anna-Kristin Kaufmann, Didac Montero Mendez, Wojciech Adam Wajerowicz, Pierre-Alexandre Fonta, Kenneth William Pirman, Julien Antonin Machon, Jonathan Raël Lurie, Dhanesh Neela Mana, Natalia Stafeeva, Alexander Désiré Ulbrich, Carolina Johanna Elisabeth Lindqvist

Modern data-driven science often consists of iterative cycles of data discovery, acquisition, preparation, analysis, model building and validation leading to knowledge discovery as well as dissemination at scale. The unique challenges of building and simul ...

2023

The Side-channel Metrics Cheat Sheet

Francesco Regazzoni, Mirjana Stojilovic, Dorian Ros, Ognjen Glamocanin

Side-channel attacks exploit a physical observable originating from a cryptographic device in order to extract its secrets. Many practically relevant advances in the field of side-channel analysis relate to security evaluations of cryptographic functions a ...

2023

Glucocorticoid-based pharmacotherapies preventing PTSD

Maria del Carmen Sandi Perez, Silvia Monari

Posttraumatic stress disorder (PTSD) is a highly disabling psychiatric condition that may arise after exposure to acute and severe trauma. It is a highly prevalent mental disorder worldwide, and the current treatment options for these patients remain limit ...

2023

Challenges and approaches in bridging the biomimicry gap in biohybrid systems of fish and robots

Vaios Papaspyros

As the field of ethology advances, especially over the past two decades, the role of animal-robot interaction tools has increasingly become essential. This importance arises from the need for controlled, repetitive, repeatable, and long-duration experiment ...

EPFL2023

TeSLA: Test-Time Self-Learning With Automatic Adversarial Augmentation

Jean-Philippe Thiran, Guillaume Marc Georges Vray, Seyedbehzad Bozorgtabar, Devavrat Tomar

Most recent test-time adaptation methods focus on only classification tasks, use specialized network architectures, destroy model calibration or rely on lightweight information from the source domain. To tackle these issues, this paper proposes a novel Tes ...

Los Alamitos2023

SwissCovid in the Perspective of Its Goals

Martin Vuagnoux, Serge Vaudenay

SwissCovid is the Swiss digital contact tracing app, which was deployed to help fighting against the COVID-19 pandemic. After a year of activity, it is high time to evaluate how effective it has been in its mission. At the highest peak, about 22% of the Sw ...

2022