Publications related to White matter fiber tract segmentation in DT-MRI using geometric flows

Modular segmentation, spatial analysis and visualization of volume electron microscopy datasets

Volume electron microscopy is the method of choice for the in situ interrogation of cellular ultrastructure at the nanometer scale, and with the increase in large raw image datasets generated, improving computational strategies for image segmentation and s ...

Nature Portfolio2024

Stability of a liquid layer draining around a horizontal cylinder: Interplay of capillary and gravity forces

François Gallaire, Shahab Eghbali, Simeon Vladimirov Djambov

We study the drainage of a viscous liquid film coating the outside of a solid horizontal cylinder, where gravity acts vertically. We focus on the limit of large Ohnesorge numbers Oh, where inertia is negligible compared to viscous effects. We first study t ...

Amer Physical Soc2024

Variational quantum time evolution without the quantum geometric tensor

Giuseppe Carleo, Riccardo Rossi, Julien Sebastian Gacon, Stefan Woerner, Jannes Willy E. Nys

Realand imaginary -time quantum state evolutions are crucial in physics and chemistry for exploring quantum dynamics, preparing ground states, and computing thermodynamic observables. On near -term devices, variational quantum time evolution is a promising ...

Amer Physical Soc2024

Aggregating Spatial and Photometric Context for Photometric Stereo

David Honzátko

Photometric stereo, a computer vision technique for estimating the 3D shape of objects through images captured under varying illumination conditions, has been a topic of research for nearly four decades. In its general formulation, photometric stereo is an ...

EPFL2024

Advancing Self-Supervised Deep Learning for 3D Scene Understanding

Seyed Mohammad Mahdi Johari

Recent advancements in deep learning have revolutionized 3D computer vision, enabling the extraction of intricate 3D information from 2D images and video sequences. This thesis explores the application of deep learning in three crucial challenges of 3D com ...

EPFL2024

Deep Learning for 3D Surface Modelling and Reconstruction

Benoît Alain René Guillard

In recent years, there has been a significant revolution in the field of deep learning, which has demonstrated its effectiveness in automatically capturing intricate patterns from large datasets. However, the majority of these successes in Computer Vision ...

EPFL2023

Automated neuron tracking inside moving and deforming C. elegans using deep learning and targeted augmentation

Sahand Jamal Rahi, Kseniia Korchagina

Reading out neuronal activity from three-dimensional (3D) functional imaging requires segmenting and tracking individual neurons. This is challenging in behaving animals if the brain moves and deforms. The traditional approach is to train a convolutional n ...

Nature Portfolio2023

Revisiting Evaluation Metrics for Semantic Segmentation: Optimization and Evaluation of Fine-grained Intersection over Union

Devis Tuia, Zifu Wang

Semantic segmentation datasets often exhibit two types of imbalance: \textit{class imbalance}, where some classes appear more frequently than others and \textit{size imbalance}, where some objects occupy more pixels than others. This causes traditional eva ...

2023

Uncertainty-aware Flexibility Envelope Prediction in Buildings with Controller-agnostic Battery Models

Baptiste Schubnel, Colin Neil Jones, Rafael Eduardo Carrillo Rangel, Pierre-Jean Alet, Paul Scharnhorst

Buildings are a promising source of flexibility for the application of demand response. In this work, we introduce a novel battery model formulation to capture the state evolution of a single building. Being fully data-driven, the battery model identificat ...

IEEE2023

Machine-Learning-Enhanced Procedural Modeling for 4D Historical Cities Reconstruction

Frédéric Kaplan, Isabella Di Lenardo, Rémi Guillaume Petitpierre, Beatrice Vaienti

The generation of 3D models depicting cities in the past holds great potential for documentation and educational purposes. However, it is often hindered by incomplete historical data and the specialized expertise required. To address these challenges, we p ...

2023

Lightning interaction with the ionosphere

Farhad Rachidi-Haeri, Marcos Rubinstein, Dongshuai Li

Lightning discharges, including cloud-to-ground (CG) and intracloud (IC) lightning, are known to emit electromagnetic pulses (EMPs) in a wide frequency band ranging from few Hz up to hundreds MHz [1]. During the breakdown and ionization processes (mostly f ...

IET2023

Learning to Represent and Reconstruct 3D Deformable Objects

Jan Bednarík

Representing and reconstructing 3D deformable shapes are two tightly linked problems that have long been studied within the computer vision field. Deformable shapes are truly ubiquitous in the real world, whether be it specific object classes such as human ...

EPFL2022

Weakly Supervised Volumetric Image Segmentation with Deformed Templates

Pascal Fua, Pamuditha Udaranga Wickramasinghe, Patrick Moller Jensen, Mian Akbar Shah

There are many approaches to weakly-supervised training of networks to segment 2D images. By contrast, existing approaches to segmenting volumetric images rely on full-supervision of a subset of 2D slices of the 3D volume. We propose an approach to volume ...

Springer2022

Fast 3D Modeling of Prosthetic Robotic Hands Based on a Multi-Layer Deformable Design

Daniel Thalmann

Current research of designing prosthetic robotic hands mainly focuses on improving their functionality by devising new mechanical structures and actuation systems. Most of existing work relies on a single structure/system (e.g., bone-only or tissue-only) a ...

WHIOCE PUBLISHING PTE LTD, SINGAPORE2022

Determining crack kinematics from imaged crack patterns

Katrin Beyer, Amir Rezaie, Bryan German Pantoja Rosero, Ketson Roberto Maximiano Dos Santos

Determining the relationship between the cause of damage and the subsequent structural behavior of infrastructure systems requires an accurate characterization of the propagation of cracks, which represents the evolution of the damage state. When no inform ...

2022

Encoder-Decoder Models for Human Segmentation and Motion Analysis

Isinsu Katircioglu

Detecting people from 2D images and analyzing their motion in 3D have been long standing computer vision problems central to numerous applications such as autonomous driving and athletic training. Recently, with the availability of large amounts of trainin ...

EPFL2022

Synthesis and Analysis of 3D shapes with Geometric Deep Learning in Computer-Aided Engineering

Edoardo Remelli

In this thesis, we advocate that Computer-Aided Engineering could benefit from a Geometric Deep Learning revolution, similarly to the way that Deep Learning revolutionized Computer Vision. To do so, we consider a variety of Computer-Aided Engineering pr ...

EPFL2022

Exploiting Marginal Stability in Slow-Fast Quasilinear Dynamical Systems

Alessia Ferraro

The accurate investigation of many geophysical phenomena via direct numerical simulations is computationally not possible nowadays due to the huge range of spatial and temporal scales to be resolved. Therefore advances in this field rely on the development ...

EPFL2022

Image-based geometric digital twinning for stone masonry elements

Katrin Beyer, Bryan German Pantoja Rosero, Savvas Saloustros

We present an image-based pipeline for generating geometrical digital twins (GDTs) of stone masonry elements with detail down to the stone level. For this purpose, we acquire RGB images of the individual stones and of the wall during the construction phase ...

2022

Planted XY model: Thermodynamics and inference

Siyu Chen, Guanhao Huang, Giovanni Piccioli, Lenka Zdeborová

In this paper we study a fully connected planted spin glass named the planted XY model. Motivation for studying this system comes both from the spin glass field and the one of statistical inference where it models the angular synchronization problem. We de ...

2022