Publications associées à Écologie

At what spatial scale does natural selection operate? Using multiscale frameworks to calibrate the effects of environmental factors across landscape continuums

Patterns in nature arise from processes interacting across a continuum of spatial scales, where new relationships emerge at each level of investigation. These patterns are nested features encompassing fine-scale local patterns, such as topography and geolo ...

EPFL2024

Collective motion in a sheet of microswimmers

Viktor Skultéty

Self-propelled particles such as bacteria or algae swimming through a fluid are non-equilibrium systems where particle motility breaks microscopic detailed balance, often resulting in large-scale collective motion. Previous theoretical work has identified ...

Nature Portfolio2024

Combined Earth observations reveal the sequence of conditions leading to a large algal bloom in Lake Geneva

Damien Bouffard, Rafael Sebastian Reiss, Abolfazl Irani Rahaghi, Oscar Rodrigo Sepúlveda Steiner, Marco Toffolon, Frédéric Charles Soulignac

Freshwater algae exhibit complex dynamics, particularly in meso-oligotrophic lakes with sudden and dramatic increases in algal biomass following long periods of low background concentration. While the fundamental prerequisites for algal blooms, namely ligh ...

Springernature2024

The microbial genomics of glacier-fed streams: adaptations to an extreme ecosystem

Massimo Bourquin

Glacier-fed streams are the cold, ultra-oligotrophic, and unstable streams that are fed by glacial meltwater. Despite these extreme conditions, they harbour a diverse and abundant microbial diversity that develops into biofilms, covering the boulders and s ...

EPFL2024

Multivariate geometric anisotropic Cox processes

Sofia Charlotta Olhede

This paper introduces a new modeling and inference framework for multivariate and anisotropic point processes. Building on recent innovations in multivariate spatial statistics, we propose a new family of multivariate anisotropic random fields, and from th ...

WILEY2023

Fulfilling Riverscape – a creative interdisciplinary approach

Giovanni De Cesare, Paolo Perona, Sylvie Tram Nguyen

Hydrological, water technological, managerial and human induced processes affect aquatic, amphibian and terrestrial organisms and their habitats, far beyond the main channel of a river. This Riverscape includes diverse riparian habitats which vary in space ...

2023

Addressing chemical pollution in biodiversity research

Kristin Schirmer, Ahmed Tlili, Colette vom Berg

Climate change, biodiversity loss, and chemical pollution are planetary-scale emergencies requiring urgent mitigation actions. As these "triple crises" are deeply interlinked, they need to be tackled in an integrative manner. However, while climate change ...

WILEY2023

Homogeneous Environmental Selection Structures the Bacterial Communities of Benthic Biofilms in Proglacial Floodplain Streams

Tom Ian Battin, Hannes Markus Peter, Susheel Bhanu Busi, Grégoire Marie Octave Edouard Michoud, Leïla Ezzat, Massimo Bourquin, Jade Brandani, Tyler Joe Kohler, Stylianos Fodelianakis

Streams draining proglacial floodplains harbor benthic biofilms comprised of diverse microbial communities. These high-mountain ecosystems are rapidly changing with climate warming, and it is therefore critical to better understand the mechanisms underlyin ...

AMER SOC MICROBIOLOGY2023

Territory Subject: Designing Human-Environment Interactions in Cities and Territories

Paola Viganò, Sylvie Tram Nguyen, Qinyi Zhang

A brief critique of the evolution of ecological perspectives surrounding the current environmental crises in the age of climate age and Anthropogenic impacts is highlighted across the inter-disciplinary fields of landscape, urbanism, and ecology. First, re ...

Springer Cham2023

Coupled carbon and nitrogen cycling regulates the cnidarian–algal symbiosis

Anders Meibom, Stéphane Laurent Escrig, Nils Rädecker

Efficient nutrient recycling underpins the ecological success of cnidarian-algal symbioses in oligotrophic waters. In these symbioses, nitrogen limitation restricts the growth of algal endosymbionts in hospite and stimulates their release of photosynthates ...

Nature Research2023

Global Mapping of Potential and Climatic Plant‐Available Soil Water

Sara Bonetti, Dani Or

The estimation of plant-available soil water (PASW) is essential to quantify transpiration fluxes, the onset of heatwaves, irrigation water management, land-use decisions, vegetation ecology, and land surface memory in climate models. PASW is the amount of ...

2023

Consider the Anoxic Microsite: Acknowledging and Appreciating Spatiotemporal Redox Heterogeneity in Soils and Sediments

Meret Aeppli, Vincent Noel

Reduction-oxidation (redox) reactions underlie essentially all biogeochemical cycles. Like most soil properties and processes, redox is spatiotemporally heterogeneous. However, unlike other soil features, redox heterogeneity has yet to be incorporated into ...

AMER CHEMICAL SOC2023

Perspectives in machine learning for wildlife conservation

Devis Tuia, Alexander Mathis, Mackenzie Mathis, Benjamin Alexander Kellenberger

Inexpensive and accessible sensors are accelerating data acquisition in animal ecology. These technologies hold great potential for large-scale ecological understanding, but are limited by current processing approaches which inefficiently distill data into ...

Nature Research2022

A study model for reconstructing urban ecological niches

Francesco Mondada, Robert Matthew Mills

The Living Arch is a study model that was designed to showcase our ongoing research into bioactive architectural systems to be inhabited by honeybees. The arch is a synergistic combination of 3D printing and active mycelia growth, created for a museum exhi ...

CRC Press2022

Accounting for foliar gradients in Vc(max) and J(max) improves estimates of net CO2 exchange of forests

Christoph Bachofen

Vertical gradients in the canopy represent a major challenge for scaling from foliar photosynthesis to ecosystem-level CO2 fluxes. We tested whether accounting for independent gradients of carboxylation capacity (Vc(max)) and photosynthetic electron transp ...

ELSEVIER2022

Surface water and groundwater interactions in salt marshes and their impact on plant ecology and coastal biogeochemistry

David Andrew Barry

Salt marshes are highly productive intertidal wetlands providing important ecological services for maintaining coastal biodiversity, buffering against oceanic storms, and acting as efficient carbon sinks. However, about half of these wetlands have been los ...

2022

A roadmap to understanding diversity and function of coral reef-associated fungi

Claudia Isabella Pogoreutz

Tropical coral reefs are hotspots of marine productivity, owing to the association of reef-building corals with endosymbiotic algae and metabolically diverse bacterial communities. However, the functional importance of fungi, well-known for their contribut ...

OXFORD UNIV PRESS2022

Sources, Occurrence and Characteristics of Fluorescent Biological Aerosol Particles Measured over the Pristine Southern Ocean

Julia Schmale, Andrea Baccarini, Robin Lewis Modini, Sebastian Johannes Heinz-Josef Landwehr, Alireza Moallemi

In this study we investigate the occurrence of primary biological aerosol particles (PBAP) over all sectors of the Southern Ocean (SO) based on a 90-day dataset collected during the Antarctic Circumnavigation Expedition (ACE) in austral summer 2016-2017. S ...

2021

Rapid molecular evolution of Spiroplasma symbionts of Drosophila

Bruno Lemaitre, Florent François Masson

Spiroplasma is a genus of Mollicutes whose members include plant pathogens, insect pathogens and endosymbionts of animals. Spiroplasma phenotypes have been repeatedly observed to be spontaneously lost in Drosophila cultures, and several studies have docume ...

2021

Engineering of ecological niches to create stable artificial consortia for complex biotransformations

Jeremy Luterbacher

The design of controllable artificial microbial consortia has attracted considerable interest in recent years to capitalize on the inherent advantages in comparison to monocultures such as the distribution of the metabolic burden by division of labor, the ...

2020