Publications associées à Seascape genomics to empower coral reef conservation strategies

Gene expression of Pocillopora damicornis coral larvae in response to acidification and ocean warming

Objectives The endosymbiosis with Symbiodiniaceae is key to the ecological success of reef-building corals. However, climate change is threatening to destabilize this symbiosis on a global scale. Most studies looking into the response of corals to heat str ...

BMC2024

Data and scripts for the RaFSIP scheme

Athanasios Nenes, Paraskevi Georgakaki

This repository contains microphysics routines, scripts, and processed data from the Weather Research and Forecasting (WRF) model simulations presented in the paper "RaFSIP: Parameterizing ice multiplication in models using a machine learning approach", by ...

Zenodo2024

Quantifying the Unknown: Data-Driven Approaches and Applications in Energy Systems

Paul Scharnhorst

In light of the challenges posed by climate change and the goals of the Paris Agreement, electricity generation is shifting to a more renewable and decentralized pattern, while the operation of systems like buildings is increasingly electrified. This calls ...

EPFL2024

Data and scripts for "Unraveling secondary ice production in winter orographic clouds through a synergy of in-situ observations, remote sensing and modeling"

Alexis Berne, Satoshi Takahama, Athanasios Nenes, Georgia Sotiropoulou, Anne-Claire Marie Billault--Roux, Paraskevi Georgakaki, Romanos Foskinis, Kunfeng Gao

This repository contains field observations and processed data from the Weather Research and Forecasting (WRF) model simulations and the Cloud Resolving Model Radar Simulator (CR-SIM), alongside scripts designed to reproduce the figures presented in the pa ...

Zenodo2024

Robust machine learning for neuroscientific inference

Steffen Schneider

Modern neuroscience research is generating increasingly large datasets, from recording thousands of neurons over long timescales to behavioral recordings of animals spanning weeks, months, or even years. Despite a great variety in recording setups and expe ...

EPFL2024

Nanoindentation hardness and modulus of Al2O3-SiO2-CaO and MnO-SiO2-FeO inclusions in iron

Andreas Mortensen, Léa Deillon, Alejandra Inés Slagter, Eva Luisa Vogt, David Hernandez Escobar, Jonathan Aristya Setyadji

Dataset corresponding to the following manuscript: Slagter, A., Setyadji, J.A., Vogt, E.L. et al. Nanoindentation Hardness and Modulus of Al2O3–SiO2–CaO and MnO–SiO2–FeO Inclusions in Iron. Metall Mater Trans A (2024). https://doi.org/10.1007/s11661-024-0 ...

Zenodo2024

Dataset for '3D printing of customizable transient bioelectronics and sensors'

Danick Briand, Nicolas Francis Fumeaux

This data set contains the data collected during the FNS project Green Piezo (Grant no. 179064) in association with the recent publication entitled “3D printing of customizable transient bioelectronics and sensors”. This work aims to study and demonstrate ...

Zenodo2024

Spatiotemporal Dynamics of Flow and Hydrochemistry in Drainage Networks

Izabela Bujak-Ozga

Despite their high ecological value, non-perennial streams have received less attention than their perennial counterparts. This doctoral thesis addresses this disparity by advancing knowledge on the dynamics of the drainage density and hydrologic processes ...

EPFL2024

The Reef Environment Centralized InFormation System (RECIFS) : An integrated geo‐environmental database for coral reef research and conservation

Stéphane Joost, Oliver Michele Selmoni

Motivation: Host to intricate networks of marine species, coral reefs are among the most biologically diverse ecosystems on Earth. Over the past few decades, major degradations of coral reefs have been observed worldwide, which is largely attributed to the ...

2023

Excess labile carbon promotes diazotroph abundance in heat-stressed octocorals

Claudia Isabella Pogoreutz

Nitrogen limitation is the foundation of stable coral-algal symbioses. Diazotrophs, prokaryotes capable of fixing N-2 into ammonia, support the productivity of corals in oligotrophic waters, but could contribute to the destabilization of holobiont function ...

ROYAL SOC2023

Toward a common standard for data and specimen provenance in life sciences

Marco Mattavelli, Anna Marsano

Open and practical exchange, dissemination, and reuse of specimens and data have become a fundamental requirement for life sciences research. The quality of the data obtained and thus the findings and knowledge derived is thus significantly influenced by t ...

WILEY2023

Genomics and conservation: Guidance from training to analyses and applications

Annie Sandrine Guillaume

Environmental change is intensifying the biodiversity crisis and threatening species across the tree of life. Conservation genomics can help inform conservation actions and slow biodiversity loss. However, more training, appropriate use of novel genomic me ...

Wiley2023

Dated: Guidelines for Creating Synthetic Datasets for Engineering Design Applications

Jürg Alexander Schiffmann, Cyril Picard, Faez Ahmed

Exploiting the recent advancements in artificial intelligence, showcased by ChatGPT and DALL-E, in real-world applications necessitates vast, domain-specific, and publicly accessible datasets. Unfortunately, the scarcity of such datasets poses a significan ...

Amer Soc Mechanical Engineers2023

On Artificial Intelligence and Manipulation

Marcello Ienca

The increasing diffusion of novel digital and online sociotechnical systems for arational behavioral influence based on Artificial Intelligence (AI), such as social media, microtargeting advertising, and personalized search algorithms, has brought about ne ...

SPRINGER2023

1805-1898 Census Records of Lausanne : a Long Digital Dataset for Demographic History

Marion Kramer, Isabella Di Lenardo, Rémi Guillaume Petitpierre, Lucas Arnaud André Rappo

This historical dataset stems from the project of automatic extraction of 72 census records of Lausanne, Switzerland. The complete dataset covers a century of historical demography in Lausanne (1805-1898), which corresponds to 18,831 pages, and nearly 6 mi ...

Zenodo2023

Housing, street and health: a new systemic research framework

Stéphane Joost, Paola Viganò, Catarina Wall Gago, Anna Pagani, Derek Pierre Christie, Dusan Licina, Valentin Daniel Maurice Bourdon, Idris Guessous, Mathias Lerch

As the world’s population grows in cities, urban dwellers spend a large amount of time inside their home, making housing health ever more important. Critical for residents’ health, the interactions between indoor residential environments and outdoor enviro ...

2023

Toward data-driven materials design: From atoms to pilot plants

Kevin Maik Jablonka

Discovering new materials is essential but challenging, time-consuming, and expensive. In many cases, simulations can be useful for estimating material properties. For many of the most interesting properties, however, simulations are infeasible because of ...

EPFL2023

Photobiology and metabolic interactions in the symbiotic jellyfish Cassiopea

Niclas Heidelberg Lyndby

The symbiont-bearing jellyfish Cassiopea live a benthic lifestyle, positioning themselves upside-down on sediments in shallow waters to allow their endosymbiotic algae to photosynthesize in the sunlight. Over the last decades Cassiopea has become increasin ...

EPFL2023

Use of an unmanned aerial-aquatic vehicle for acoustic sensing in freshwater ecosystems

Mirko Kovac, Raphael Zufferey

Freshwater ecosystems are endangered, underfunded and understudied, making new methods such as passive acoustic monitoring (PAM) essential for improving the efficiency and effectiveness of data collection. However, many challenges are still to be addressed ...

Wiley2023

A Framework for Autonomic Computing for In Situ Imageomics

Nina Marion Aurélia Van Tiel

In situ imageomics is a new approach to study ecological, biological and evolutionary systems wherein large image and video data sets are captured in the wild and machine learning methods are used to infer biological traits of individual organisms, animal ...

The Institute of Electrical and Electronics Engineers, Inc2023