Publications associées à Robust T1-Weighted Structural Brain Imaging and Morphometry at 7T Using MP2RAGE

Aggregating Spatial and Photometric Context for Photometric Stereo

Photometric stereo, a computer vision technique for estimating the 3D shape of objects through images captured under varying illumination conditions, has been a topic of research for nearly four decades. In its general formulation, photometric stereo is an ...

EPFL2024

Modular segmentation, spatial analysis and visualization of volume electron microscopy datasets

Martin Weigert

Volume electron microscopy is the method of choice for the in situ interrogation of cellular ultrastructure at the nanometer scale, and with the increase in large raw image datasets generated, improving computational strategies for image segmentation and s ...

Nature Portfolio2024

Fast and Future: Towards Efficient Forecasting in Video Semantic Segmentation

Evann Pierre Guy Courdier

Deep learning has revolutionized the field of computer vision, a success largely attributable to the growing size of models, datasets, and computational power. Simultaneously, a critical pain point arises as several computer vision applications are deploye ...

EPFL2024

Development and clinical validation of computational imaging biomarkers for neurodegenerative diseases

Veronica Lily Ravano

Neurodegenerative and neuroinflammatory disorders often involve complex pathophysiological mechanisms that are â to this date â only partially understood. A more comprehensive understanding of those microstructural processes and their characterization ...

EPFL2024

Reliable data-driven decision-making through optimal transport

Bahar Taskesen

Decision-making permeates every aspect of human and societal development, from individuals' daily choices to the complex decisions made by communities and institutions. Central to effective decision-making is the discipline of optimization, which seeks th ...

EPFL2024

Segmenting Without Annotating: Crack Segmentation and Monitoring via Post-Hoc Classifier Explanations

Devis Tuia, Hugo Laurent Pascal Porta, Florent Evariste Forest, Olga Fink

Monitoring the cracks in walls, roads and other types of infrastructure is essential to ensure the safety of a structure, and plays an important role in structural health monitoring. Automatic visual inspection allows an efficient, costeffective and safe h ...

Research Publishing2023

SAGTTA: SALIENCY GUIDED TEST TIME AUGMENTATION FOR MEDICAL IMAGE SEGMENTATION ACROSS VENDOR DOMAIN SHIFT

Seyedbehzad Bozorgtabar, Devavrat Tomar

Test time augmentation has been shown to be an effective approach to combat domain shifts in deep learning. Despite their promising performance levels, the interpretability of the underlying used models is however low. Saliency maps have been widely used i ...

IEEE2023

Functional neuroimaging options for tinnitus

Patrick Karl Alois Neff

Background: The pathophysiology behind tinnitus is still not well understood. Different imaging methods help in the understanding of the complex relationships that lead to the perception of tinnitus.Objective: Herein, different functional imaging methods t ...

SPRINGER2023

Affordance segmentation of hand-occluded containers from exocentric images

Andrea Cavallaro

Visual affordance segmentation identifies the surfaces of an object an agent can interact with. Common challenges for the identification of affordances are the variety of the geometry and physical properties of these surfaces as well as occlusions. In this ...

Ieee Computer Soc2023

Revisiting Evaluation Metrics for Semantic Segmentation: Optimization and Evaluation of Fine-grained Intersection over Union

Devis Tuia, Zifu Wang

Semantic segmentation datasets often exhibit two types of imbalance: \textit{class imbalance}, where some classes appear more frequently than others and \textit{size imbalance}, where some objects occupy more pixels than others. This causes traditional eva ...

2023

Scale-Aware Test-Time Click Adaptation for Pulmonary Nodule and Mass Segmentation

Bo Du, Li Zhang, Zhigang Li, Jiancheng Yang

Pulmonary nodules and masses are crucial imaging features in lung cancer screening that require careful management in clinical diagnosis. Despite the success of deep learning-based medical image segmentation, the robust performance on various sizes of lesi ...

Springer International Publishing Ag2023

BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets

Pascal Fua, Sean Lewis Hill, Amos Sironi, Jiancheng Yang, Jian Zhou, Siqi Liu, Xiang Li, Jie Zhou

BigNeuron is an open community bench-testing platform with the goal of setting open standards for accurate and fast automatic neuron tracing. We gathered a diverse set of image volumes across several species that is representative of the data obtained in m ...

2023

Dense Image-based Predictions for Comics Analysis

Deblina Bhattacharjee

Dense image-based prediction methods have advanced tremendously in recent years. Their remarkable development has been possible due to the ample availability of real-world imagery. While these methods work well on photographs, their abilities do not genera ...

EPFL2023

Detecting Anomalies and Obstacles in Road Scenes

Krzysztof Maciej Lis

We address the problem of segmenting anomalies and unusual obstacles in road scenes for the purpose of self-driving safety. The objects in question are not present in the common training sets as it is not feasible to collect and annotate examples for every ...

EPFL2023

Self-supervised Dense Representation Learning for Live-Cell Microscopy with Time Arrow Prediction

Max Stieber, Martin Weigert, Benjamin Tobias Gallusser

State-of-the-art object detection and segmentation methods for microscopy images rely on supervised machine learning, which requires laborious manual annotation of training data. Here we present a self-supervised method based on time arrow prediction pre-t ...

Springer International Publishing Ag2023

Correlated-photon imaging at 10 volumetric images per second

Claudio Bruschini, Edoardo Charbon, Arin Can Ülkü, Paul Mos

The correlation properties of light provide an outstanding tool to overcome the limitations of traditional imaging techniques. A relevant case is represented by correlation plenoptic imaging (CPI), a quantum-inspired volumetric imaging protocol employing s ...

Nature Portfolio2023

Neural Distributed Image Compression with Cross-Attention Feature Alignment

Ali Garjani

We consider the problem of compressing an information source when a correlated one is available as side information only at the decoder side, which is a special case of the distributed source coding problem in information theory. In particular, we consider ...

IEEE COMPUTER SOC2023

Class Specific Feature Disentanglement and Text Embeddings for Multi-label Generalized Zero Shot CXR Classification

Seyedbehzad Bozorgtabar

Robustness of medical image classification models is limited by its exposure to the candidate disease classes. Generalized zero shot learning (GZSL) aims at correctly predicting seen and unseen classes and most current GZSL approaches have focused on the s ...

Springer International Publishing Ag2023

3D reconstruction of curvilinear one-dimensional objects viewed in transmission electron microscopy

Gulnaz Ganeeva

To obtain a more complete understanding of material microstructure at the nanoscale and to gain profound insights into their properties, there is a growing need for more efficient and precise methods that can streamline the process of 3D imaging using a tr ...

EPFL2023

Clinical feasibility and validation of the accelerated T2 mapping sequence GRAPPATINI in brain imaging

Tom Hilbert

Rationale and objectives: To prospectively evaluate feasibility and robustness of an accelerated T2 mapping sequence (GRAPPATINI) in brain imaging and to assess its synthetic T2-weighted images (sT2w) in comparison with a standard T2-weighted sequence (T2 ...

CELL PRESS2023