Publications related to Systematics

A Framework for Autonomic Computing for In Situ Imageomics

In situ imageomics is a new approach to study ecological, biological and evolutionary systems wherein large image and video data sets are captured in the wild and machine learning methods are used to infer biological traits of individual organisms, animal ...

The Institute of Electrical and Electronics Engineers, Inc2023

Brain mitochondrial diversity and network organization predict anxiety-like behavior in male mice

Maria del Carmen Sandi Perez

The brain and behavior are under energetic constraints, limited by mitochondrial energy transformation capacity. However, the mitochondria-behavior relationship has not been systematically studied at a brain-wide scale. Here we examined the association bet ...

Nature Research2023

Surprise and novelty in the brain

Wulfram Gerstner, Johanni Michael Brea, Alireza Modirshanechi, Sophia Becker

Notions of surprise and novelty have been used in various experimental and theoretical studies across multiple brain areas and species. However, 'surprise' and 'novelty' refer to different quantities in different studies, which raises concerns about whethe ...

CURRENT BIOLOGY LTD2023

The microbiome of cryospheric ecosystems

Tom Ian Battin, Hannes Markus Peter, Susheel Bhanu Busi, Grégoire Marie Octave Edouard Michoud, Leïla Ezzat, Massimo Bourquin, Tyler Joe Kohler, Stylianos Fodelianakis

The cryosphere includes those parts of Earth where water or soil is frozen, such as snow, ice, glaciers and permafrost soils. Here, the authors present a global inventory of cryospheric microbial communities and their genetic repertoires. ...

Nature Portfolio2022

Progress in Unraveling Atmospheric New Particle Formation and Growth Across the Arctic

Julia Schmale, Andrea Baccarini

New particle formation (NPF) and growth can be an important source of cloud condensation nuclei for the Arctic atmosphere, where cloud formation is sensitive to their availability. Low-level clouds influence the Arctic energy budget, and likely contribute ...

2021

Role of JETPEAK database in validation of synthetic neutron camera diagnostics and ASCOT- AFSI fast particle and fusion product calculation chain in JET

Henri Weisen

JETPEAK is a comprehensive stationary-state database and a work environment for JET diagnostics data, processed data and simulations suitable for a wide variety of analytical tasks. It enables systematic modelling and efficient interpretation of synthetic ...

IOP PUBLISHING LTD2019

Influence of geometrical parameters of chamfered or rounded orifices on head losses

Anton Schleiss, Giovanni De Cesare, Nicolas Jean François Pascal Ghislain Adam

Orifices are largely used in pipeline systems. The most common application is to measure the discharge of the water flowing through. However, orifices may be used to adapt hydroelectric power plants submitted to moderate increase of installed generation ca ...

Taylor & Francis Ltd2019

Characterization of phosphorus species distribution in waste activated sludge after anaerobic digestion and chemical precipitation with Fe3+ and Mg2+

Ho Ling Li, Jie Zhang, Lin Li

Given the great concern about phosphorus (P) resource depletion, it's promising to recover P from waste activated sludge (WAS) especially for agricultural application. To this end, it's necessary to understand the P speciation and fractionation within the ...

ELSEVIER SCIENCE SA2019

Classification of Resilience Techniques Against Functional Errors at Higher Abstraction Layers of Digital Systems

David Atienza Alonso

Nanoscale technology nodes bring reliability concerns back to the center stage of digital system design. A systematic classification of approaches that increase system resilience in the presence of functional hardware (HW)-induced errors is presented, deal ...

Assoc Computing Machinery2017

A systematic approach for thermal stability predictions of chemicals and their risk assessment: Pattern recognition and compounds classification based on thermal decomposition curves

Thierry Meyer, Nadia Baati, Annik Nanchen, Laetitia Mage

In the context of process and product design, predictive models are increasingly employed. Decomposition properties of chemicals may be experimentally determined through calorimetric measurements, and a few molecular structure-based models- which correlate ...

Institution of Chemical Engineers2017

Self-Healing Gold Mirrors and Filters at Liquid-Liquid Interfaces

Hubert Girault, Frédéric Gumy, Pekka Eero Peljo, Micheal Diarmaid Scanlon, Evgeny Smirnov

The optical and morphological properties of lustrous metal self-healing liquid-like nanofilms were systematically studied towards different applications (e.g., optical mirrors or filters). These nanofilms were formed by a one-step self-assembly methodology ...

Royal Soc Chemistry2016

Classification Framework for Analysis and Modeling of Physically Induced Reliability Violations

David Atienza Alonso

Technology downscaling is expected to amplify a variety of reliability concerns in future digital systems. A good understanding of reliability threats is crucial for the creation of efficient mitigation techniques. This survey performs a systematic classif ...

Assoc Computing Machinery2015

Genetic, molecular and physiological basis of variation in Drosophila gut immunocompetence

Bruno Lemaitre, Bart Deplancke, Andreas Massouras, Dani Osman, Maroun Bou Sleiman

Gut immunocompetence involves immune, stress and regenerative processes. To investigate the determinants underlying inter-individual variation in gut immunocompetence, we perform enteric infection of 140 Drosophila lines with the entomopathogenic bacterium ...

Nature Publishing Group2015

Importance of Toxicokinetics for lnterspecies Variation in Sensitivity to Chemicals

Kristin Schirmer

Interspecies variation in sensitivity to synthetic chemicals can be orders of magnitude large. Species traits causing the variation can be related to toxicokinetics (uptake, distribution, biotransformation, elimination) or toxicodynamics (interaction with ...

American Chemical Society2014

Inferring the Evolutionary History of Primate microRNA Binding Sites: Overcoming Motif Counting Biases

Jeffrey David Jensen, Feng Gao

The first microRNAs (miRNAs) were identified as essential, conserved regulators of gene expression, targeting the same genes across nearly all bilaterians. However, there are also prominent examples of conserved miRNAs whose functions appear to have shifte ...

Oxford Univ Press2014

On the Use of Extents for Process Monitoring and Fault Diagnosis

Dominique Bonvin, Julien Léo Billeter, Sriniketh Srinivasan

Process monitoring and fault diagnosis are broadly used to control quality and enforce safety compliance in industrial processes. Processes are commonly monitored by online spectroscopy, with either PCA or calibration techniques such as PLS being used to p ...

2014

On the use of extents for process monitoring and fault diagnosis

Dominique Bonvin, Julien Léo Billeter, Sriniketh Srinivasan

Process monitoring and fault diagnosis are broadly used to control quality and enforce safety compliance in industrial processes. Processes are commonly monitored by online spectroscopy, with either PCA or calibration techniques such as PLS being used to p ...

2014

New insights into the classification and nomenclature of cortical GABAergic interneurons

Henry Markram, Sean Lewis Hill, Yun Wang, Ruth Benavides Piccione, Jean Rossier, Zoltan Kisvarday

A systematic classification and accepted nomenclature of neuron types is much needed but is currently lacking. This article describes a possible taxononnical solution for classifying GABAergic interneurons of the cerebral cortex based on a novel, web-based ...

Nature Publishing Group2013

Integrated Biosensors for Personalized Medicine

Giovanni De Micheli, Sandro Carrara, Irene Taurino, Cristina Boero, Camilla Baj-Rossi

Biosensors are heterogenous devices, incorporating biological struc- tures combined with electronics, optical or other readout systems. They have been developed for detecting different biomolecules and/or pathogens and represent a key technology for advanc ...

Ieee2012

TIBA: a tool for phylogeny inference from rearrangement data with bootstrap analysis

Bernard Moret, Yu Lin, Vaibhav Rajan

TIBA is a tool to reconstruct phylogenetic trees from rearrangement data that consist of ordered lists of synteny blocks (or genes), where each synteny block is shared with all of its homologues in the input genomes. The evolution of these synteny blocks, ...

Oxford University Press2012